Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRP9P49458 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRP9P49458 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRP9P49458 AL596087.1-201ENST00000400979 1969 ntBASIC14.63□□□□□ -0.07
SRP9P49458 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRP9P49458 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.63□□□□□ -0.07
SRP9P49458 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRP9P49458 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRP9P49458 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SRP9P49458 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.63□□□□□ -0.07
SRP9P49458 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SRP9P49458 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SRP9P49458 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SRP9P49458 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.62□□□□□ -0.07
SRP9P49458 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SRP9P49458 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP9P49458 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP9P49458 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.62□□□□□ -0.07
SRP9P49458 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SRP9P49458 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.62□□□□□ -0.07
SRP9P49458 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.62□□□□□ -0.07
SRP9P49458 AC026396.1-201ENST00000419388 421 ntBASIC14.62□□□□□ -0.07
SRP9P49458 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP9P49458 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
SRP9P49458 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.62□□□□□ -0.07
SRP9P49458 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP9P49458 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
SRP9P49458 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.62□□□□□ -0.07
SRP9P49458 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SRP9P49458 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
SRP9P49458 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
SRP9P49458 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SRP9P49458 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP9P49458 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.62□□□□□ -0.07
SRP9P49458 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.62□□□□□ -0.07
SRP9P49458 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.62□□□□□ -0.07
SRP9P49458 GPR89P-201ENST00000407924 1495 ntBASIC14.62□□□□□ -0.07
SRP9P49458 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SRP9P49458 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.61□□□□□ -0.07
SRP9P49458 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
SRP9P49458 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.61□□□□□ -0.07
SRP9P49458 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SRP9P49458 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SRP9P49458 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 MRPL3P1-201ENST00000400109 1033 ntBASIC14.61□□□□□ -0.07
SRP9P49458 AC009078.2-202ENST00000463353 338 ntBASIC14.61□□□□□ -0.07
SRP9P49458 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 SLC25A6P4-201ENST00000586535 553 ntBASIC14.61□□□□□ -0.07
SRP9P49458 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.61□□□□□ -0.07
SRP9P49458 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.61□□□□□ -0.07
SRP9P49458 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.61□□□□□ -0.07
SRP9P49458 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 AC148477.8-201ENST00000624298 468 ntBASIC14.61□□□□□ -0.07
SRP9P49458 FAM215A-202ENST00000632077 792 ntBASIC14.61□□□□□ -0.07
SRP9P49458 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.61□□□□□ -0.07
SRP9P49458 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.61□□□□□ -0.07
SRP9P49458 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SRP9P49458 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SRP9P49458 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms