Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CBX5P45973 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.21□□□□□ -0.13
CBX5P45973 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CBX5P45973 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CBX5P45973 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.21□□□□□ -0.13
CBX5P45973 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.21□□□□□ -0.13
CBX5P45973 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.21□□□□□ -0.13
CBX5P45973 AC087499.1-201ENST00000418141 1075 ntBASIC14.21□□□□□ -0.13
CBX5P45973 AL645929.1-201ENST00000420084 975 ntBASIC14.21□□□□□ -0.13
CBX5P45973 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CBX5P45973 NUS1P1-201ENST00000446295 882 ntBASIC14.21□□□□□ -0.13
CBX5P45973 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.21□□□□□ -0.13
CBX5P45973 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.21□□□□□ -0.13
CBX5P45973 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.21□□□□□ -0.13
CBX5P45973 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.21□□□□□ -0.13
CBX5P45973 AC005363.2-201ENST00000618631 242 ntBASIC14.21□□□□□ -0.13
CBX5P45973 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CBX5P45973 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.21□□□□□ -0.13
CBX5P45973 TMEM191A-211ENST00000637163 1067 ntBASIC14.21□□□□□ -0.13
CBX5P45973 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.21□□□□□ -0.13
CBX5P45973 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CBX5P45973 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CBX5P45973 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.21□□□□□ -0.13
CBX5P45973 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CBX5P45973 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CBX5P45973 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CBX5P45973 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.21□□□□□ -0.14
CBX5P45973 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CBX5P45973 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CBX5P45973 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CBX5P45973 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CBX5P45973 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.21□□□□□ -0.14
CBX5P45973 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CBX5P45973 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CBX5P45973 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.2□□□□□ -0.14
CBX5P45973 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
CBX5P45973 AL603832.2-201ENST00000566195 2125 ntBASIC14.2□□□□□ -0.14
CBX5P45973 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CBX5P45973 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
CBX5P45973 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.2□□□□□ -0.14
CBX5P45973 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.2□□□□□ -0.14
CBX5P45973 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CBX5P45973 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 GGT4P-201ENST00000623672 1708 ntBASIC14.2□□□□□ -0.14
CBX5P45973 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 AC015656.1-201ENST00000624209 3578 ntBASIC14.2□□□□□ -0.14
CBX5P45973 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.2□□□□□ -0.14
CBX5P45973 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.2□□□□□ -0.14
CBX5P45973 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.2□□□□□ -0.14
CBX5P45973 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.2□□□□□ -0.14
CBX5P45973 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 AC006449.6-201ENST00000612330 2296 ntBASIC14.2□□□□□ -0.14
CBX5P45973 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CBX5P45973 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CBX5P45973 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CBX5P45973 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CBX5P45973 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CBX5P45973 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CBX5P45973 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CBX5P45973 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.19□□□□□ -0.14
CBX5P45973 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CBX5P45973 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.19□□□□□ -0.14
CBX5P45973 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CBX5P45973 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CBX5P45973 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms