Protein–RNA interactions for Protein: P43487

RANBP1, Ran-specific GTPase-activating protein, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP1P43487 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RANBP1P43487 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.2■□□□□ 0.02
RANBP1P43487 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.2■□□□□ 0.02
RANBP1P43487 MYCLP1-201ENST00000372451 1075 ntBASIC15.2■□□□□ 0.02
RANBP1P43487 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RANBP1P43487 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RANBP1P43487 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.2■□□□□ 0.02
RANBP1P43487 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.2■□□□□ 0.02
RANBP1P43487 EGLN1P1-201ENST00000531623 762 ntBASIC15.2■□□□□ 0.02
RANBP1P43487 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 FITM1-202ENST00000559294 800 ntBASIC15.2■□□□□ 0.02
RANBP1P43487 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 ITM2C-210ENST00000620962 501 ntBASIC15.2■□□□□ 0.02
RANBP1P43487 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
RANBP1P43487 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
RANBP1P43487 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.2■□□□□ 0.02
RANBP1P43487 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RANBP1P43487 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.2■□□□□ 0.02
RANBP1P43487 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RANBP1P43487 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.19■□□□□ 0.02
RANBP1P43487 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.19■□□□□ 0.02
RANBP1P43487 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.19■□□□□ 0.02
RANBP1P43487 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.19■□□□□ 0.02
RANBP1P43487 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RANBP1P43487 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 TSPY14P-201ENST00000303979 915 ntBASIC15.19■□□□□ 0.02
RANBP1P43487 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RANBP1P43487 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.19■□□□□ 0.02
RANBP1P43487 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.19■□□□□ 0.02
RANBP1P43487 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.19■□□□□ 0.02
RANBP1P43487 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.19■□□□□ 0.02
RANBP1P43487 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 AC024563.2-201ENST00000603282 481 ntBASIC15.19■□□□□ 0.02
RANBP1P43487 AC009154.2-201ENST00000621177 724 ntBASIC15.19■□□□□ 0.02
RANBP1P43487 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.19■□□□□ 0.02
RANBP1P43487 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RANBP1P43487 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
RANBP1P43487 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
RANBP1P43487 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.19■□□□□ 0.02
RANBP1P43487 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RANBP1P43487 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.19■□□□□ 0.02
RANBP1P43487 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms