Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.09■□□□□ 0.33
MTHFRP42898 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MTHFRP42898 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.09■□□□□ 0.33
MTHFRP42898 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MTHFRP42898 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.09■□□□□ 0.33
MTHFRP42898 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
MTHFRP42898 AC092658.1-201ENST00000505836 891 ntBASIC17.09■□□□□ 0.33
MTHFRP42898 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.09■□□□□ 0.33
MTHFRP42898 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.09■□□□□ 0.33
MTHFRP42898 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
MTHFRP42898 AL512343.1-201ENST00000605837 169 ntBASIC17.09■□□□□ 0.33
MTHFRP42898 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.09■□□□□ 0.33
MTHFRP42898 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 AC006277.1-201ENST00000624348 1610 ntBASIC17.09■□□□□ 0.33
MTHFRP42898 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.09■□□□□ 0.33
MTHFRP42898 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.09■□□□□ 0.33
MTHFRP42898 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
MTHFRP42898 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MTHFRP42898 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.09■□□□□ 0.33
MTHFRP42898 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
MTHFRP42898 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.09■□□□□ 0.33
MTHFRP42898 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MTHFRP42898 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
MTHFRP42898 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MTHFRP42898 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
MTHFRP42898 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MTHFRP42898 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTHFRP42898 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.08■□□□□ 0.33
MTHFRP42898 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.08■□□□□ 0.33
MTHFRP42898 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTHFRP42898 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTHFRP42898 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTHFRP42898 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MTHFRP42898 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
MTHFRP42898 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.08■□□□□ 0.32
MTHFRP42898 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.08■□□□□ 0.32
MTHFRP42898 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
MTHFRP42898 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MTHFRP42898 SPDYE17-201ENST00000412399 783 ntBASIC17.08■□□□□ 0.32
MTHFRP42898 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.08■□□□□ 0.32
MTHFRP42898 AC124947.2-201ENST00000547118 1133 ntBASIC17.08■□□□□ 0.32
MTHFRP42898 AC123567.1-201ENST00000548294 1261 ntBASIC17.08■□□□□ 0.32
MTHFRP42898 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.32
MTHFRP42898 AP005482.1-201ENST00000563722 1273 ntBASIC17.08■□□□□ 0.32
MTHFRP42898 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.08■□□□□ 0.32
MTHFRP42898 MIR6069-201ENST00000620069 79 ntBASIC17.08■□□□□ 0.32
MTHFRP42898 AC004461.2-201ENST00000629517 803 ntBASIC17.08■□□□□ 0.32
MTHFRP42898 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.08■□□□□ 0.32
MTHFRP42898 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
MTHFRP42898 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.08■□□□□ 0.32
MTHFRP42898 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
MTHFRP42898 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MTHFRP42898 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.08■□□□□ 0.32
MTHFRP42898 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
MTHFRP42898 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTHFRP42898 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
MTHFRP42898 KRT8P39-201ENST00000396270 1433 ntBASIC17.07■□□□□ 0.32
MTHFRP42898 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.07■□□□□ 0.32
MTHFRP42898 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTHFRP42898 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.07■□□□□ 0.32
MTHFRP42898 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTHFRP42898 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTHFRP42898 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.07■□□□□ 0.32
MTHFRP42898 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.07■□□□□ 0.32
MTHFRP42898 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.07■□□□□ 0.32
MTHFRP42898 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.07■□□□□ 0.32
MTHFRP42898 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MTHFRP42898 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.07■□□□□ 0.32
MTHFRP42898 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.07■□□□□ 0.32
MTHFRP42898 AC007389.4-201ENST00000454674 793 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms