Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL3P19876 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.8□□□□□ -0.2
CXCL3P19876 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CXCL3P19876 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.8□□□□□ -0.2
CXCL3P19876 MIR4785-201ENST00000585005 73 ntBASIC13.8□□□□□ -0.2
CXCL3P19876 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL3P19876 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL3P19876 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL3P19876 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.8□□□□□ -0.2
CXCL3P19876 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.8□□□□□ -0.2
CXCL3P19876 AC006504.5-208ENST00000588784 2401 ntBASIC13.8□□□□□ -0.2
CXCL3P19876 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL3P19876 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL3P19876 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL3P19876 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CXCL3P19876 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL3P19876 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CXCL3P19876 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CXCL3P19876 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CXCL3P19876 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL3P19876 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL3P19876 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL3P19876 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CXCL3P19876 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.79□□□□□ -0.2
CXCL3P19876 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL3P19876 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.79□□□□□ -0.2
CXCL3P19876 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CXCL3P19876 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CXCL3P19876 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL3P19876 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL3P19876 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CXCL3P19876 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL3P19876 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL3P19876 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL3P19876 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CXCL3P19876 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL3P19876 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL3P19876 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.78□□□□□ -0.2
CXCL3P19876 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
CXCL3P19876 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CXCL3P19876 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
CXCL3P19876 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CXCL3P19876 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CXCL3P19876 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.78□□□□□ -0.2
CXCL3P19876 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.78□□□□□ -0.2
CXCL3P19876 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.78□□□□□ -0.2
CXCL3P19876 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CXCL3P19876 AC008550.1-201ENST00000511500 884 ntBASIC13.78□□□□□ -0.2
CXCL3P19876 STK19B-204ENST00000512515 211 ntBASIC13.78□□□□□ -0.2
CXCL3P19876 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 DHDH-203ENST00000522614 776 ntTSL 5 BASIC13.78□□□□□ -0.2
CXCL3P19876 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CXCL3P19876 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CXCL3P19876 FITM1-202ENST00000559294 800 ntBASIC13.78□□□□□ -0.2
CXCL3P19876 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.78□□□□□ -0.2
CXCL3P19876 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.78□□□□□ -0.2
CXCL3P19876 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL3P19876 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms