Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 AC009078.2-202ENST00000463353 338 ntBASIC19.62■□□□□ 0.73
NCLP19338 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.62■□□□□ 0.73
NCLP19338 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 MIR5100-201ENST00000579544 119 ntBASIC19.62■□□□□ 0.73
NCLP19338 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 AL121912.1-201ENST00000603683 238 ntBASIC19.62■□□□□ 0.73
NCLP19338 REXO1L6P-202ENST00000619970 1078 ntBASIC19.62■□□□□ 0.73
NCLP19338 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.62■□□□□ 0.73
NCLP19338 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NCLP19338 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC19.62■□□□□ 0.73
NCLP19338 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NCLP19338 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
NCLP19338 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.61■□□□□ 0.73
NCLP19338 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.61■□□□□ 0.73
NCLP19338 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
NCLP19338 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.61■□□□□ 0.73
NCLP19338 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NCLP19338 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
NCLP19338 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.61■□□□□ 0.73
NCLP19338 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 AC092384.3-202ENST00000564646 2873 ntBASIC19.61■□□□□ 0.73
NCLP19338 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.61■□□□□ 0.73
NCLP19338 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.61■□□□□ 0.73
NCLP19338 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.61■□□□□ 0.73
NCLP19338 SAPCD2P3-201ENST00000455031 850 ntBASIC19.61■□□□□ 0.73
NCLP19338 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.61■□□□□ 0.73
NCLP19338 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.61■□□□□ 0.73
NCLP19338 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.61■□□□□ 0.73
NCLP19338 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NCLP19338 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NCLP19338 AC114341.1-201ENST00000618070 349 ntBASIC19.61■□□□□ 0.73
NCLP19338 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC19.61■□□□□ 0.73
NCLP19338 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NCLP19338 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 MTHFR-217ENST00000641820 1569 ntBASIC19.61■□□□□ 0.73
NCLP19338 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NCLP19338 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
NCLP19338 AC097637.2-201ENST00000624096 1997 ntBASIC19.61■□□□□ 0.73
NCLP19338 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.61■□□□□ 0.73
NCLP19338 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.61■□□□□ 0.73
NCLP19338 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC19.6■□□□□ 0.73
NCLP19338 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.6■□□□□ 0.73
NCLP19338 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
NCLP19338 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NCLP19338 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NCLP19338 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.6■□□□□ 0.73
NCLP19338 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.6■□□□□ 0.73
NCLP19338 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.6■□□□□ 0.73
NCLP19338 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.6■□□□□ 0.73
NCLP19338 AL020989.1-201ENST00000422979 469 ntBASIC19.6■□□□□ 0.73
NCLP19338 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.6■□□□□ 0.73
NCLP19338 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.6■□□□□ 0.73
NCLP19338 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.6■□□□□ 0.73
NCLP19338 AP002469.2-201ENST00000531724 424 ntBASIC19.6■□□□□ 0.73
NCLP19338 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.6■□□□□ 0.73
NCLP19338 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 AL591684.3-201ENST00000605187 298 ntBASIC19.6■□□□□ 0.73
NCLP19338 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 ME2P1-201ENST00000426028 1970 ntBASIC19.6■□□□□ 0.73
NCLP19338 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.6■□□□□ 0.73
NCLP19338 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.6■□□□□ 0.73
NCLP19338 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
NCLP19338 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms