Protein–RNA interactions for Protein: P11586

MTHFD1, C-1-tetrahydrofolate synthase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1P11586 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFD1P11586 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
MTHFD1P11586 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MTHFD1P11586 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFD1P11586 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFD1P11586 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFD1P11586 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.26■□□□□ 0.19
MTHFD1P11586 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.26■□□□□ 0.19
MTHFD1P11586 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
MTHFD1P11586 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.26■□□□□ 0.19
MTHFD1P11586 SNHG9-202ENST00000564014 471 ntBASIC16.26■□□□□ 0.19
MTHFD1P11586 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFD1P11586 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFD1P11586 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 AL596442.2-201ENST00000610240 980 ntBASIC16.26■□□□□ 0.19
MTHFD1P11586 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
MTHFD1P11586 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MTHFD1P11586 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
MTHFD1P11586 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
MTHFD1P11586 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.26■□□□□ 0.19
MTHFD1P11586 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.26■□□□□ 0.19
MTHFD1P11586 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
MTHFD1P11586 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.25■□□□□ 0.19
MTHFD1P11586 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.25■□□□□ 0.19
MTHFD1P11586 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MTHFD1P11586 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFD1P11586 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MTHFD1P11586 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFD1P11586 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFD1P11586 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.25■□□□□ 0.19
MTHFD1P11586 AP000344.2-201ENST00000512987 629 ntBASIC16.25■□□□□ 0.19
MTHFD1P11586 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFD1P11586 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.25■□□□□ 0.19
MTHFD1P11586 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.25■□□□□ 0.19
MTHFD1P11586 AC026120.1-201ENST00000611536 926 ntBASIC16.25■□□□□ 0.19
MTHFD1P11586 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.25■□□□□ 0.19
MTHFD1P11586 AL139011.1-202ENST00000642063 584 ntBASIC16.25■□□□□ 0.19
MTHFD1P11586 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
MTHFD1P11586 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 AL671710.1-201ENST00000610245 2349 ntBASIC16.25■□□□□ 0.19
MTHFD1P11586 SNX33P1-201ENST00000592116 1762 ntBASIC16.25■□□□□ 0.19
MTHFD1P11586 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
MTHFD1P11586 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
MTHFD1P11586 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.25■□□□□ 0.19
MTHFD1P11586 AKAP8P1-201ENST00000434743 1349 ntBASIC16.24■□□□□ 0.19
MTHFD1P11586 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
MTHFD1P11586 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
MTHFD1P11586 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.24■□□□□ 0.19
MTHFD1P11586 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFD1P11586 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFD1P11586 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.24■□□□□ 0.19
MTHFD1P11586 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFD1P11586 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFD1P11586 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFD1P11586 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
MTHFD1P11586 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
MTHFD1P11586 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.24■□□□□ 0.19
MTHFD1P11586 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.24■□□□□ 0.19
MTHFD1P11586 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.24■□□□□ 0.19
MTHFD1P11586 TFAMP1-201ENST00000412727 736 ntBASIC16.24■□□□□ 0.19
MTHFD1P11586 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.24■□□□□ 0.19
MTHFD1P11586 CNN2P11-201ENST00000429351 262 ntBASIC16.24■□□□□ 0.19
MTHFD1P11586 SPDYE11-202ENST00000450699 704 ntBASIC16.24■□□□□ 0.19
MTHFD1P11586 TIMM8BP1-201ENST00000452384 211 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms