Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UBL4AP11441 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.23■□□□□ 0.03
UBL4AP11441 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
UBL4AP11441 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.23■□□□□ 0.03
UBL4AP11441 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 PMS2P4-201ENST00000412466 1052 ntBASIC15.23■□□□□ 0.03
UBL4AP11441 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.23■□□□□ 0.03
UBL4AP11441 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
UBL4AP11441 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.23■□□□□ 0.03
UBL4AP11441 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.23■□□□□ 0.03
UBL4AP11441 AC027601.4-201ENST00000611259 610 ntBASIC15.23■□□□□ 0.03
UBL4AP11441 AC020765.3-201ENST00000613051 740 ntBASIC15.23■□□□□ 0.03
UBL4AP11441 AC004877.2-201ENST00000623941 599 ntBASIC15.23■□□□□ 0.03
UBL4AP11441 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UBL4AP11441 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.23■□□□□ 0.03
UBL4AP11441 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.23■□□□□ 0.03
UBL4AP11441 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.23■□□□□ 0.03
UBL4AP11441 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
UBL4AP11441 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.23■□□□□ 0.03
UBL4AP11441 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UBL4AP11441 PCGF3-213ENST00000620529 1899 ntBASIC15.23■□□□□ 0.03
UBL4AP11441 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.22■□□□□ 0.03
UBL4AP11441 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
UBL4AP11441 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
UBL4AP11441 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.22■□□□□ 0.03
UBL4AP11441 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.22■□□□□ 0.03
UBL4AP11441 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.22■□□□□ 0.03
UBL4AP11441 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.22■□□□□ 0.03
UBL4AP11441 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.22■□□□□ 0.03
UBL4AP11441 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.22■□□□□ 0.03
UBL4AP11441 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.22■□□□□ 0.03
UBL4AP11441 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
UBL4AP11441 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.22■□□□□ 0.03
UBL4AP11441 AC140113.2-201ENST00000604370 208 ntBASIC15.22■□□□□ 0.03
UBL4AP11441 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.22■□□□□ 0.03
UBL4AP11441 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.22■□□□□ 0.03
UBL4AP11441 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
UBL4AP11441 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 AC025580.3-201ENST00000617932 1424 ntBASIC15.22■□□□□ 0.03
UBL4AP11441 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
UBL4AP11441 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.22■□□□□ 0.03
UBL4AP11441 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBL4AP11441 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms