Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 AC006538.1-201ENST00000567905 1585 ntBASIC14.34□□□□□ -0.11
SFTPBP07988 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
SFTPBP07988 AL136379.1-201ENST00000623471 2642 ntBASIC14.34□□□□□ -0.11
SFTPBP07988 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 AC006277.1-201ENST00000624348 1610 ntBASIC14.34□□□□□ -0.11
SFTPBP07988 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.34□□□□□ -0.11
SFTPBP07988 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.34□□□□□ -0.11
SFTPBP07988 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 AC092910.1-201ENST00000482027 1129 ntBASIC14.34□□□□□ -0.11
SFTPBP07988 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.34□□□□□ -0.11
SFTPBP07988 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.34□□□□□ -0.11
SFTPBP07988 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.34□□□□□ -0.11
SFTPBP07988 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.34□□□□□ -0.11
SFTPBP07988 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.34□□□□□ -0.11
SFTPBP07988 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.34□□□□□ -0.11
SFTPBP07988 AF228730.7-201ENST00000641842 219 ntBASIC14.34□□□□□ -0.11
SFTPBP07988 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.34□□□□□ -0.11
SFTPBP07988 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
SFTPBP07988 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.34□□□□□ -0.11
SFTPBP07988 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SFTPBP07988 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.34□□□□□ -0.11
SFTPBP07988 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SFTPBP07988 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SFTPBP07988 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SFTPBP07988 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPBP07988 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPBP07988 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPBP07988 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPBP07988 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
SFTPBP07988 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPBP07988 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPBP07988 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.33□□□□□ -0.11
SFTPBP07988 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SFTPBP07988 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPBP07988 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SFTPBP07988 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.33□□□□□ -0.12
SFTPBP07988 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.33□□□□□ -0.12
SFTPBP07988 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.33□□□□□ -0.12
SFTPBP07988 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 AC005052.1-201ENST00000625181 2492 ntBASIC14.33□□□□□ -0.12
SFTPBP07988 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.33□□□□□ -0.12
SFTPBP07988 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
SFTPBP07988 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SFTPBP07988 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.33□□□□□ -0.12
SFTPBP07988 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.33□□□□□ -0.12
SFTPBP07988 HLA-J-202ENST00000469281 1241 ntBASIC14.33□□□□□ -0.12
SFTPBP07988 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms