Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.17■□□□□ 0.98
COL5A2P05997 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.17■□□□□ 0.98
COL5A2P05997 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
COL5A2P05997 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
COL5A2P05997 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
COL5A2P05997 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 AGER-203ENST00000375065 665 ntTSL 2 BASIC21.17■□□□□ 0.98
COL5A2P05997 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC21.17■□□□□ 0.98
COL5A2P05997 AP001063.1-201ENST00000568332 529 ntBASIC21.17■□□□□ 0.98
COL5A2P05997 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
COL5A2P05997 AC000095.1-201ENST00000603208 874 ntBASIC21.17■□□□□ 0.98
COL5A2P05997 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
COL5A2P05997 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 BNIP3P1-202ENST00000550043 1585 ntBASIC21.17■□□□□ 0.98
COL5A2P05997 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC21.17■□□□□ 0.98
COL5A2P05997 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL5A2P05997 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL5A2P05997 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL5A2P05997 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
COL5A2P05997 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL5A2P05997 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC21.16■□□□□ 0.98
COL5A2P05997 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.16■□□□□ 0.98
COL5A2P05997 KRT8P13-201ENST00000463294 1010 ntBASIC21.16■□□□□ 0.98
COL5A2P05997 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL5A2P05997 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
COL5A2P05997 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC21.16■□□□□ 0.98
COL5A2P05997 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL5A2P05997 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.16■□□□□ 0.98
COL5A2P05997 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC21.16■□□□□ 0.98
COL5A2P05997 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL5A2P05997 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL5A2P05997 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL5A2P05997 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.16■□□□□ 0.98
COL5A2P05997 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL5A2P05997 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.15■□□□□ 0.98
COL5A2P05997 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
COL5A2P05997 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 CNN2P8-201ENST00000421872 913 ntBASIC21.15■□□□□ 0.98
COL5A2P05997 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC21.15■□□□□ 0.98
COL5A2P05997 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.15■□□□□ 0.98
COL5A2P05997 AC093433.1-201ENST00000458048 571 ntBASIC21.15■□□□□ 0.98
COL5A2P05997 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.15■□□□□ 0.98
COL5A2P05997 AC022137.2-201ENST00000503482 481 ntBASIC21.15■□□□□ 0.98
COL5A2P05997 RPL8-205ENST00000527914 551 ntTSL 3 BASIC21.15■□□□□ 0.98
COL5A2P05997 HNRNPUP1-201ENST00000554987 333 ntBASIC21.15■□□□□ 0.98
COL5A2P05997 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC21.15■□□□□ 0.98
COL5A2P05997 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.15■□□□□ 0.98
COL5A2P05997 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 AC141586.5-201ENST00000624546 2050 ntBASIC21.15■□□□□ 0.98
COL5A2P05997 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
COL5A2P05997 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC21.15■□□□□ 0.98
COL5A2P05997 REXO1L8P-201ENST00000604378 1897 ntBASIC21.15■□□□□ 0.98
COL5A2P05997 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
COL5A2P05997 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL5A2P05997 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
COL5A2P05997 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC21.14■□□□□ 0.98
COL5A2P05997 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC21.14■□□□□ 0.98
COL5A2P05997 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC21.14■□□□□ 0.98
COL5A2P05997 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC21.14■□□□□ 0.98
COL5A2P05997 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC21.14■□□□□ 0.98
COL5A2P05997 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL5A2P05997 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
COL5A2P05997 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
COL5A2P05997 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COL5A2P05997 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL5A2P05997 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms