Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.34■□□□□ 0.53
GGPS1O95749 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.34■□□□□ 0.53
GGPS1O95749 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.34■□□□□ 0.53
GGPS1O95749 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.34■□□□□ 0.53
GGPS1O95749 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
GGPS1O95749 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.34■□□□□ 0.53
GGPS1O95749 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 AC008738.7-201ENST00000609744 511 ntBASIC18.34■□□□□ 0.53
GGPS1O95749 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.34■□□□□ 0.53
GGPS1O95749 AC106886.4-201ENST00000623557 2502 ntBASIC18.34■□□□□ 0.53
GGPS1O95749 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GGPS1O95749 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
GGPS1O95749 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
GGPS1O95749 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GGPS1O95749 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.34■□□□□ 0.53
GGPS1O95749 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
GGPS1O95749 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.33■□□□□ 0.53
GGPS1O95749 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.33■□□□□ 0.53
GGPS1O95749 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.33■□□□□ 0.53
GGPS1O95749 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.33■□□□□ 0.53
GGPS1O95749 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
GGPS1O95749 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
GGPS1O95749 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GGPS1O95749 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.33■□□□□ 0.53
GGPS1O95749 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.33■□□□□ 0.52
GGPS1O95749 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.33■□□□□ 0.52
GGPS1O95749 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.33■□□□□ 0.52
GGPS1O95749 CRB3P1-201ENST00000449338 276 ntBASIC18.33■□□□□ 0.52
GGPS1O95749 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.33■□□□□ 0.52
GGPS1O95749 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.33■□□□□ 0.52
GGPS1O95749 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.33■□□□□ 0.52
GGPS1O95749 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.33■□□□□ 0.52
GGPS1O95749 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.33■□□□□ 0.52
GGPS1O95749 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.33■□□□□ 0.52
GGPS1O95749 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.33■□□□□ 0.52
GGPS1O95749 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GGPS1O95749 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GGPS1O95749 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
GGPS1O95749 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.32■□□□□ 0.52
GGPS1O95749 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
GGPS1O95749 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
GGPS1O95749 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 GGT3P-204ENST00000453783 1664 ntBASIC18.32■□□□□ 0.52
GGPS1O95749 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.32■□□□□ 0.52
GGPS1O95749 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.32■□□□□ 0.52
GGPS1O95749 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.32■□□□□ 0.52
GGPS1O95749 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.32■□□□□ 0.52
GGPS1O95749 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GGPS1O95749 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.32■□□□□ 0.52
GGPS1O95749 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.32■□□□□ 0.52
GGPS1O95749 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.32■□□□□ 0.52
GGPS1O95749 AGGF1P2-201ENST00000426656 2106 ntBASIC18.32■□□□□ 0.52
GGPS1O95749 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
GGPS1O95749 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.32■□□□□ 0.52
GGPS1O95749 UBALD1-205ENST00000590891 2641 ntBASIC18.32■□□□□ 0.52
GGPS1O95749 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GGPS1O95749 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.32■□□□□ 0.52
GGPS1O95749 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.32■□□□□ 0.52
GGPS1O95749 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GGPS1O95749 AC005622.1-201ENST00000636801 1703 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms