Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SNX18-202ENST00000343017 3140 ntBASIC14.7□□□□□ -0.06
CDRT1O95170 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.7□□□□□ -0.06
CDRT1O95170 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CDRT1O95170 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CDRT1O95170 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.69□□□□□ -0.06
CDRT1O95170 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CDRT1O95170 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.69□□□□□ -0.06
CDRT1O95170 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.69□□□□□ -0.06
CDRT1O95170 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CDRT1O95170 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.69□□□□□ -0.06
CDRT1O95170 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.69□□□□□ -0.06
CDRT1O95170 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 AC006486.2-201ENST00000624246 2199 ntBASIC14.69□□□□□ -0.06
CDRT1O95170 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.69□□□□□ -0.06
CDRT1O95170 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CDRT1O95170 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 RCN1P1-201ENST00000400413 996 ntBASIC14.69□□□□□ -0.06
CDRT1O95170 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.69□□□□□ -0.06
CDRT1O95170 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.69□□□□□ -0.06
CDRT1O95170 VENTXP7-201ENST00000475503 772 ntBASIC14.69□□□□□ -0.06
CDRT1O95170 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.69□□□□□ -0.06
CDRT1O95170 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.69□□□□□ -0.06
CDRT1O95170 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.69□□□□□ -0.06
CDRT1O95170 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.69□□□□□ -0.06
CDRT1O95170 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.69□□□□□ -0.06
CDRT1O95170 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.69□□□□□ -0.06
CDRT1O95170 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CDRT1O95170 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CDRT1O95170 AC138035.3-201ENST00000622706 2791 ntBASIC14.68□□□□□ -0.06
CDRT1O95170 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.68□□□□□ -0.06
CDRT1O95170 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.68□□□□□ -0.06
CDRT1O95170 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.68□□□□□ -0.06
CDRT1O95170 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CDRT1O95170 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.68□□□□□ -0.06
CDRT1O95170 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CDRT1O95170 AP003680.1-201ENST00000598970 3660 ntBASIC14.68□□□□□ -0.06
CDRT1O95170 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CDRT1O95170 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CDRT1O95170 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.68□□□□□ -0.06
CDRT1O95170 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.68□□□□□ -0.06
CDRT1O95170 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CDRT1O95170 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 AC246785.2-201ENST00000432512 513 ntBASIC14.68□□□□□ -0.06
CDRT1O95170 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.68□□□□□ -0.06
CDRT1O95170 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14.68□□□□□ -0.06
CDRT1O95170 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.68□□□□□ -0.06
CDRT1O95170 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.68□□□□□ -0.06
CDRT1O95170 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.68□□□□□ -0.06
CDRT1O95170 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 AC069224.1-201ENST00000566372 1715 ntBASIC14.68□□□□□ -0.06
CDRT1O95170 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.68□□□□□ -0.06
CDRT1O95170 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.68□□□□□ -0.06
CDRT1O95170 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 OR2I1P-210ENST00000642037 4691 ntBASIC14.68□□□□□ -0.06
CDRT1O95170 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.68□□□□□ -0.06
CDRT1O95170 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.68□□□□□ -0.06
CDRT1O95170 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.68□□□□□ -0.06
CDRT1O95170 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CDRT1O95170 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.68□□□□□ -0.06
CDRT1O95170 AC016027.1-202ENST00000607927 1699 ntBASIC14.68□□□□□ -0.06
CDRT1O95170 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CDRT1O95170 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms