Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLSTN1O94985 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLSTN1O94985 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.23■□□□□ 0.51
CLSTN1O94985 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.23■□□□□ 0.51
CLSTN1O94985 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLSTN1O94985 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.23■□□□□ 0.51
CLSTN1O94985 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.23■□□□□ 0.51
CLSTN1O94985 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLSTN1O94985 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLSTN1O94985 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLSTN1O94985 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLSTN1O94985 AL513480.1-201ENST00000451731 511 ntBASIC18.23■□□□□ 0.51
CLSTN1O94985 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.23■□□□□ 0.51
CLSTN1O94985 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLSTN1O94985 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.23■□□□□ 0.51
CLSTN1O94985 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.23■□□□□ 0.51
CLSTN1O94985 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.23■□□□□ 0.51
CLSTN1O94985 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.23■□□□□ 0.51
CLSTN1O94985 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.23■□□□□ 0.51
CLSTN1O94985 AC018845.2-201ENST00000568326 409 ntBASIC18.23■□□□□ 0.51
CLSTN1O94985 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLSTN1O94985 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.23■□□□□ 0.51
CLSTN1O94985 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.23■□□□□ 0.51
CLSTN1O94985 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.23■□□□□ 0.51
CLSTN1O94985 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLSTN1O94985 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLSTN1O94985 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.23■□□□□ 0.51
CLSTN1O94985 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.23■□□□□ 0.51
CLSTN1O94985 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLSTN1O94985 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLSTN1O94985 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLSTN1O94985 KRT8P49-201ENST00000604166 1432 ntBASIC18.23■□□□□ 0.51
CLSTN1O94985 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.22■□□□□ 0.51
CLSTN1O94985 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.22■□□□□ 0.51
CLSTN1O94985 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.22■□□□□ 0.51
CLSTN1O94985 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.22■□□□□ 0.51
CLSTN1O94985 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 AC034105.1-201ENST00000563488 319 ntBASIC18.22■□□□□ 0.51
CLSTN1O94985 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.22■□□□□ 0.51
CLSTN1O94985 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.22■□□□□ 0.51
CLSTN1O94985 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.22■□□□□ 0.51
CLSTN1O94985 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.22■□□□□ 0.51
CLSTN1O94985 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.22■□□□□ 0.51
CLSTN1O94985 OR2I1P-209ENST00000641730 5365 ntBASIC18.22■□□□□ 0.51
CLSTN1O94985 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLSTN1O94985 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.22■□□□□ 0.51
CLSTN1O94985 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLSTN1O94985 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.22■□□□□ 0.51
CLSTN1O94985 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLSTN1O94985 CICP6-201ENST00000457191 2729 ntBASIC18.22■□□□□ 0.51
CLSTN1O94985 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLSTN1O94985 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CLSTN1O94985 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLSTN1O94985 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLSTN1O94985 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.21■□□□□ 0.51
CLSTN1O94985 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.21■□□□□ 0.51
CLSTN1O94985 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.21■□□□□ 0.51
CLSTN1O94985 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.21■□□□□ 0.51
CLSTN1O94985 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.21■□□□□ 0.51
CLSTN1O94985 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.21■□□□□ 0.51
CLSTN1O94985 CXCL1P1-201ENST00000502804 216 ntBASIC18.21■□□□□ 0.51
CLSTN1O94985 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.21■□□□□ 0.51
CLSTN1O94985 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLSTN1O94985 AC140113.2-201ENST00000604370 208 ntBASIC18.21■□□□□ 0.51
CLSTN1O94985 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.21■□□□□ 0.51
CLSTN1O94985 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 AL513523.2-202ENST00000427283 2040 ntBASIC18.21■□□□□ 0.51
CLSTN1O94985 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLSTN1O94985 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 SBF1P1-201ENST00000444527 5631 ntBASIC18.21■□□□□ 0.51
CLSTN1O94985 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLSTN1O94985 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms