Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 TUBB3P1-201ENST00000405796 1332 ntBASIC15.8■□□□□ 0.12
CPNE3O75131 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.8■□□□□ 0.12
CPNE3O75131 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.8■□□□□ 0.12
CPNE3O75131 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.8■□□□□ 0.12
CPNE3O75131 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.8■□□□□ 0.12
CPNE3O75131 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.8■□□□□ 0.12
CPNE3O75131 SLC25A39P2-201ENST00000537614 270 ntBASIC15.8■□□□□ 0.12
CPNE3O75131 AP000842.3-202ENST00000569238 1080 ntBASIC15.8■□□□□ 0.12
CPNE3O75131 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.8■□□□□ 0.12
CPNE3O75131 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CPNE3O75131 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CPNE3O75131 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CPNE3O75131 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.8■□□□□ 0.12
CPNE3O75131 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE3O75131 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE3O75131 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE3O75131 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CPNE3O75131 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CPNE3O75131 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.79■□□□□ 0.12
CPNE3O75131 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.79■□□□□ 0.12
CPNE3O75131 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.79■□□□□ 0.12
CPNE3O75131 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE3O75131 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.79■□□□□ 0.12
CPNE3O75131 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CPNE3O75131 KLF2P3-201ENST00000451977 1087 ntBASIC15.79■□□□□ 0.12
CPNE3O75131 AC125807.1-201ENST00000483097 614 ntBASIC15.79■□□□□ 0.12
CPNE3O75131 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.79■□□□□ 0.12
CPNE3O75131 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 KRT18P34-201ENST00000488218 1270 ntBASIC15.79■□□□□ 0.12
CPNE3O75131 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.79■□□□□ 0.12
CPNE3O75131 AC026150.2-201ENST00000564693 1156 ntBASIC15.79■□□□□ 0.12
CPNE3O75131 AC051619.7-201ENST00000568314 623 ntBASIC15.79■□□□□ 0.12
CPNE3O75131 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 AC005498.2-205ENST00000593218 784 ntBASIC15.79■□□□□ 0.12
CPNE3O75131 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.79■□□□□ 0.12
CPNE3O75131 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.79■□□□□ 0.12
CPNE3O75131 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE3O75131 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
CPNE3O75131 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CPNE3O75131 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 LINC00895-201ENST00000629028 1637 ntBASIC15.79■□□□□ 0.12
CPNE3O75131 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CPNE3O75131 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.79■□□□□ 0.12
CPNE3O75131 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE3O75131 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.78■□□□□ 0.12
CPNE3O75131 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CPNE3O75131 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CPNE3O75131 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.78■□□□□ 0.12
CPNE3O75131 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE3O75131 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CPNE3O75131 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CPNE3O75131 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms