Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
GFRA3O60609 AL589702.1-201ENST00000641229 1509 ntBASIC15.72■□□□□ 0.11
GFRA3O60609 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GFRA3O60609 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA3O60609 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.71■□□□□ 0.11
GFRA3O60609 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA3O60609 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.71■□□□□ 0.11
GFRA3O60609 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA3O60609 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.71■□□□□ 0.11
GFRA3O60609 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.71■□□□□ 0.11
GFRA3O60609 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA3O60609 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
GFRA3O60609 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
GFRA3O60609 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
GFRA3O60609 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA3O60609 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA3O60609 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA3O60609 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC15.71■□□□□ 0.11
GFRA3O60609 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.71■□□□□ 0.11
GFRA3O60609 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.71■□□□□ 0.11
GFRA3O60609 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.71■□□□□ 0.11
GFRA3O60609 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.71■□□□□ 0.11
GFRA3O60609 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.71■□□□□ 0.11
GFRA3O60609 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA3O60609 AL136301.1-201ENST00000615830 422 ntBASIC15.71■□□□□ 0.11
GFRA3O60609 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.71■□□□□ 0.11
GFRA3O60609 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA3O60609 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
GFRA3O60609 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GFRA3O60609 REXO1L9P-201ENST00000604264 2108 ntBASIC15.71■□□□□ 0.11
GFRA3O60609 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.71■□□□□ 0.11
GFRA3O60609 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.71■□□□□ 0.1
GFRA3O60609 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
GFRA3O60609 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA3O60609 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
GFRA3O60609 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.7■□□□□ 0.1
GFRA3O60609 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC15.7■□□□□ 0.1
GFRA3O60609 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA3O60609 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GFRA3O60609 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
GFRA3O60609 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA3O60609 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 AL008707.1-201ENST00000422498 534 ntBASIC15.7■□□□□ 0.1
GFRA3O60609 HIST3H2BA-201ENST00000436555 524 ntBASIC15.7■□□□□ 0.1
GFRA3O60609 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA3O60609 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA3O60609 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC15.7■□□□□ 0.1
GFRA3O60609 CFL1-206ENST00000527344 962 ntTSL 2 BASIC15.7■□□□□ 0.1
GFRA3O60609 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC15.7■□□□□ 0.1
GFRA3O60609 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.7■□□□□ 0.1
GFRA3O60609 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.7■□□□□ 0.1
GFRA3O60609 AC073352.2-201ENST00000609385 439 ntBASIC15.7■□□□□ 0.1
GFRA3O60609 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.7■□□□□ 0.1
GFRA3O60609 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.7■□□□□ 0.1
GFRA3O60609 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GFRA3O60609 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
GFRA3O60609 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
GFRA3O60609 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.7■□□□□ 0.1
GFRA3O60609 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
GFRA3O60609 MCC-208ENST00000514701 2855 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA3O60609 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.69■□□□□ 0.1
GFRA3O60609 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA3O60609 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA3O60609 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GFRA3O60609 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.69■□□□□ 0.1
GFRA3O60609 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
GFRA3O60609 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.69■□□□□ 0.1
GFRA3O60609 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA3O60609 MIR1202-201ENST00000408529 83 ntBASIC15.69■□□□□ 0.1
GFRA3O60609 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.69■□□□□ 0.1
GFRA3O60609 AC098935.1-201ENST00000446057 611 ntBASIC15.69■□□□□ 0.1
GFRA3O60609 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.69■□□□□ 0.1
GFRA3O60609 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.69■□□□□ 0.1
GFRA3O60609 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
GFRA3O60609 AC141586.1-203ENST00000567242 366 ntBASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms