Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 CYP2A7P1-201ENST00000595391 815 ntBASIC16.26■□□□□ 0.19
PCDHGA12O60330 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 AC060834.1-201ENST00000443027 2032 ntBASIC16.26■□□□□ 0.19
PCDHGA12O60330 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDHGA12O60330 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHGA12O60330 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 FLJ38576-201ENST00000623820 2459 ntBASIC16.25■□□□□ 0.19
PCDHGA12O60330 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 HLA-H-201ENST00000383620 1096 ntBASIC16.25■□□□□ 0.19
PCDHGA12O60330 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 MIR4492-201ENST00000581627 80 ntBASIC16.25■□□□□ 0.19
PCDHGA12O60330 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 AL359881.2-201ENST00000602973 570 ntBASIC16.25■□□□□ 0.19
PCDHGA12O60330 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 DOC2GP-204ENST00000639052 2548 ntBASIC16.25■□□□□ 0.19
PCDHGA12O60330 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDHGA12O60330 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
PCDHGA12O60330 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA12O60330 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA12O60330 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA12O60330 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA12O60330 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDHGA12O60330 MEIS3P1-201ENST00000495167 958 ntBASIC16.24■□□□□ 0.19
PCDHGA12O60330 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 CU639417.3-201ENST00000624240 1404 ntBASIC16.24■□□□□ 0.19
PCDHGA12O60330 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDHGA12O60330 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms