Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX1O43933 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PEX1O43933 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PEX1O43933 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PEX1O43933 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PEX1O43933 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PEX1O43933 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PEX1O43933 SLC25A1P1-201ENST00000528351 927 ntBASIC16.08■□□□□ 0.16
PEX1O43933 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.08■□□□□ 0.16
PEX1O43933 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.08■□□□□ 0.16
PEX1O43933 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.08■□□□□ 0.16
PEX1O43933 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.08■□□□□ 0.16
PEX1O43933 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX1O43933 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.08■□□□□ 0.16
PEX1O43933 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PEX1O43933 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.08■□□□□ 0.16
PEX1O43933 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
PEX1O43933 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.08■□□□□ 0.16
PEX1O43933 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX1O43933 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PEX1O43933 AC007326.2-201ENST00000624224 7579 ntBASIC16.08■□□□□ 0.16
PEX1O43933 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PEX1O43933 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PEX1O43933 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX1O43933 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PEX1O43933 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.08■□□□□ 0.16
PEX1O43933 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PEX1O43933 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.08■□□□□ 0.16
PEX1O43933 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PEX1O43933 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PEX1O43933 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX1O43933 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX1O43933 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
PEX1O43933 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX1O43933 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PEX1O43933 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 RPL13AP23-201ENST00000480739 586 ntBASIC16.07■□□□□ 0.16
PEX1O43933 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.07■□□□□ 0.16
PEX1O43933 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.07■□□□□ 0.16
PEX1O43933 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.07■□□□□ 0.16
PEX1O43933 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX1O43933 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.07■□□□□ 0.16
PEX1O43933 AL022326.1-202ENST00000641533 845 ntBASIC16.07■□□□□ 0.16
PEX1O43933 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX1O43933 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX1O43933 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.07■□□□□ 0.16
PEX1O43933 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
PEX1O43933 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PEX1O43933 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX1O43933 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.07■□□□□ 0.16
PEX1O43933 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
PEX1O43933 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 FRMD8P1-201ENST00000440433 1524 ntBASIC16.06■□□□□ 0.16
PEX1O43933 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PEX1O43933 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.06■□□□□ 0.16
PEX1O43933 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.06■□□□□ 0.16
PEX1O43933 SPDYE21P-201ENST00000413323 827 ntBASIC16.06■□□□□ 0.16
PEX1O43933 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PEX1O43933 PMS2P1-201ENST00000431037 1228 ntBASIC16.06■□□□□ 0.16
PEX1O43933 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PEX1O43933 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.06■□□□□ 0.16
PEX1O43933 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.06■□□□□ 0.16
PEX1O43933 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.06■□□□□ 0.16
PEX1O43933 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 AC073592.4-201ENST00000623827 446 ntBASIC16.06■□□□□ 0.16
PEX1O43933 AC107918.4-202ENST00000641623 219 ntBASIC16.06■□□□□ 0.16
PEX1O43933 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PEX1O43933 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PEX1O43933 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms