Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SLC28A2O43868 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.86■□□□□ 0.13
SLC28A2O43868 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.86■□□□□ 0.13
SLC28A2O43868 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SLC28A2O43868 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SLC28A2O43868 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
SLC28A2O43868 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
SLC28A2O43868 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC28A2O43868 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A2O43868 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 AL391256.1-201ENST00000443260 1855 ntBASIC15.85■□□□□ 0.13
SLC28A2O43868 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A2O43868 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A2O43868 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A2O43868 AC107890.1-201ENST00000422478 521 ntBASIC15.85■□□□□ 0.13
SLC28A2O43868 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A2O43868 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A2O43868 KLF2P3-201ENST00000451977 1087 ntBASIC15.85■□□□□ 0.13
SLC28A2O43868 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A2O43868 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A2O43868 AC112191.1-201ENST00000523689 701 ntBASIC15.85■□□□□ 0.13
SLC28A2O43868 SLC25A39P2-201ENST00000537614 270 ntBASIC15.85■□□□□ 0.13
SLC28A2O43868 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A2O43868 AC051619.7-201ENST00000568314 623 ntBASIC15.85■□□□□ 0.13
SLC28A2O43868 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A2O43868 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A2O43868 AL390754.1-201ENST00000619088 582 ntBASIC15.85■□□□□ 0.13
SLC28A2O43868 MIR6799-201ENST00000620297 69 ntBASIC15.85■□□□□ 0.13
SLC28A2O43868 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
SLC28A2O43868 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A2O43868 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.85■□□□□ 0.13
SLC28A2O43868 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SLC28A2O43868 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.85■□□□□ 0.13
SLC28A2O43868 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SLC28A2O43868 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
SLC28A2O43868 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
SLC28A2O43868 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 HLA-A-202ENST00000376806 1854 ntBASIC15.84■□□□□ 0.13
SLC28A2O43868 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SLC28A2O43868 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SLC28A2O43868 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
SLC28A2O43868 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC28A2O43868 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SLC28A2O43868 AC125807.1-201ENST00000483097 614 ntBASIC15.84■□□□□ 0.13
SLC28A2O43868 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A2O43868 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.84■□□□□ 0.13
SLC28A2O43868 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.84■□□□□ 0.13
SLC28A2O43868 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A2O43868 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SLC28A2O43868 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.84■□□□□ 0.13
SLC28A2O43868 GGTLC5P-201ENST00000617623 998 ntBASIC15.84■□□□□ 0.13
SLC28A2O43868 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.84■□□□□ 0.13
SLC28A2O43868 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms