Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF1O43189 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.26□□□□□ -0.13
PHF1O43189 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
PHF1O43189 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PHF1O43189 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
PHF1O43189 AC011270.2-201ENST00000624293 2550 ntBASIC14.26□□□□□ -0.13
PHF1O43189 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
PHF1O43189 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.25□□□□□ -0.13
PHF1O43189 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
PHF1O43189 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 GK-202ENST00000378941 458 ntTSL 3 BASIC14.25□□□□□ -0.13
PHF1O43189 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.25□□□□□ -0.13
PHF1O43189 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.25□□□□□ -0.13
PHF1O43189 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.25□□□□□ -0.13
PHF1O43189 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.25□□□□□ -0.13
PHF1O43189 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 GGTLC5P-201ENST00000617623 998 ntBASIC14.25□□□□□ -0.13
PHF1O43189 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 AL513523.2-202ENST00000427283 2040 ntBASIC14.25□□□□□ -0.13
PHF1O43189 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.25□□□□□ -0.13
PHF1O43189 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
PHF1O43189 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC14.25□□□□□ -0.13
PHF1O43189 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.24□□□□□ -0.13
PHF1O43189 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.24□□□□□ -0.13
PHF1O43189 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
PHF1O43189 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PHF1O43189 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PHF1O43189 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.24□□□□□ -0.13
PHF1O43189 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.24□□□□□ -0.13
PHF1O43189 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.24□□□□□ -0.13
PHF1O43189 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
PHF1O43189 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.24□□□□□ -0.13
PHF1O43189 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
PHF1O43189 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 AL139400.1-201ENST00000366220 510 ntBASIC14.24□□□□□ -0.13
PHF1O43189 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
PHF1O43189 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.24□□□□□ -0.13
PHF1O43189 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 AP000344.2-201ENST00000512987 629 ntBASIC14.24□□□□□ -0.13
PHF1O43189 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.24□□□□□ -0.13
PHF1O43189 AC069262.1-201ENST00000539058 672 ntBASIC14.24□□□□□ -0.13
PHF1O43189 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
PHF1O43189 AL031432.2-201ENST00000566714 459 ntBASIC14.24□□□□□ -0.13
PHF1O43189 AL928711.1-201ENST00000570165 459 ntBASIC14.24□□□□□ -0.13
PHF1O43189 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.24□□□□□ -0.13
PHF1O43189 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.24□□□□□ -0.13
PHF1O43189 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms