Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PHGDHO43175 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PHGDHO43175 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.36■□□□□ 0.21
PHGDHO43175 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 MIR4751-201ENST00000578027 74 ntBASIC16.36■□□□□ 0.21
PHGDHO43175 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PHGDHO43175 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.36■□□□□ 0.21
PHGDHO43175 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PHGDHO43175 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.36■□□□□ 0.21
PHGDHO43175 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.36■□□□□ 0.21
PHGDHO43175 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
PHGDHO43175 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.36■□□□□ 0.21
PHGDHO43175 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PHGDHO43175 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 AC005622.1-201ENST00000636801 1703 ntBASIC16.36■□□□□ 0.21
PHGDHO43175 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PHGDHO43175 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PHGDHO43175 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PHGDHO43175 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.35■□□□□ 0.21
PHGDHO43175 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.35■□□□□ 0.21
PHGDHO43175 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.35■□□□□ 0.21
PHGDHO43175 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
PHGDHO43175 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.35■□□□□ 0.21
PHGDHO43175 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.35■□□□□ 0.21
PHGDHO43175 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PHGDHO43175 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
PHGDHO43175 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.35■□□□□ 0.21
PHGDHO43175 HMGA1P7-201ENST00000406908 502 ntBASIC16.35■□□□□ 0.21
PHGDHO43175 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.35■□□□□ 0.21
PHGDHO43175 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.35■□□□□ 0.21
PHGDHO43175 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.35■□□□□ 0.21
PHGDHO43175 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.35■□□□□ 0.21
PHGDHO43175 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.35■□□□□ 0.21
PHGDHO43175 MIR4515-201ENST00000584082 81 ntBASIC16.35■□□□□ 0.21
PHGDHO43175 MIR7706-201ENST00000613747 67 ntBASIC16.35■□□□□ 0.21
PHGDHO43175 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.35■□□□□ 0.21
PHGDHO43175 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.35■□□□□ 0.21
PHGDHO43175 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PHGDHO43175 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.35■□□□□ 0.21
PHGDHO43175 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PHGDHO43175 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.35■□□□□ 0.21
PHGDHO43175 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PHGDHO43175 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PHGDHO43175 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.35■□□□□ 0.21
PHGDHO43175 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PHGDHO43175 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
PHGDHO43175 CDC14C-201ENST00000428251 1719 ntBASIC16.34■□□□□ 0.21
PHGDHO43175 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.34■□□□□ 0.21
PHGDHO43175 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.34■□□□□ 0.21
PHGDHO43175 RPS2P28-201ENST00000314255 741 ntBASIC16.34■□□□□ 0.21
PHGDHO43175 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.34■□□□□ 0.21
PHGDHO43175 RNU1-129P-201ENST00000384064 167 ntBASIC16.34■□□□□ 0.21
PHGDHO43175 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 AC108751.1-201ENST00000490852 363 ntBASIC16.34■□□□□ 0.21
PHGDHO43175 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PHGDHO43175 CXCL1P1-201ENST00000502804 216 ntBASIC16.34■□□□□ 0.21
PHGDHO43175 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms