Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC28A1O00337 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SLC28A1O00337 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC28A1O00337 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
SLC28A1O00337 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 AC092910.1-201ENST00000482027 1129 ntBASIC15.82■□□□□ 0.12
SLC28A1O00337 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.82■□□□□ 0.12
SLC28A1O00337 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SLC28A1O00337 AC148477.8-201ENST00000624298 468 ntBASIC15.82■□□□□ 0.12
SLC28A1O00337 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.82■□□□□ 0.12
SLC28A1O00337 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 AC069224.1-201ENST00000566372 1715 ntBASIC15.82■□□□□ 0.12
SLC28A1O00337 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SLC28A1O00337 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 AP005117.1-202ENST00000581724 1908 ntBASIC15.82■□□□□ 0.12
SLC28A1O00337 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SLC28A1O00337 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.82■□□□□ 0.12
SLC28A1O00337 FLJ16779-201ENST00000612722 7638 ntBASIC15.82■□□□□ 0.12
SLC28A1O00337 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
SLC28A1O00337 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A1O00337 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A1O00337 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A1O00337 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
SLC28A1O00337 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC28A1O00337 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SLC28A1O00337 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A1O00337 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A1O00337 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.81■□□□□ 0.12
SLC28A1O00337 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC28A1O00337 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A1O00337 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SLC28A1O00337 AC108751.1-201ENST00000490852 363 ntBASIC15.81■□□□□ 0.12
SLC28A1O00337 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A1O00337 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A1O00337 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.81■□□□□ 0.12
SLC28A1O00337 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SLC28A1O00337 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.81■□□□□ 0.12
SLC28A1O00337 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.81■□□□□ 0.12
SLC28A1O00337 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.81■□□□□ 0.12
SLC28A1O00337 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SLC28A1O00337 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC28A1O00337 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC28A1O00337 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SLC28A1O00337 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.8■□□□□ 0.12
SLC28A1O00337 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.8■□□□□ 0.12
SLC28A1O00337 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.8■□□□□ 0.12
SLC28A1O00337 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
SLC28A1O00337 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SLC28A1O00337 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A1O00337 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SLC28A1O00337 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SLC28A1O00337 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.79■□□□□ 0.12
SLC28A1O00337 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms