Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PDLIM1O00151 LINC00895-201ENST00000629028 1637 ntBASIC15.7■□□□□ 0.1
PDLIM1O00151 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 POM121L3P-201ENST00000419331 1163 ntBASIC15.7■□□□□ 0.1
PDLIM1O00151 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.7■□□□□ 0.1
PDLIM1O00151 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PDLIM1O00151 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.7■□□□□ 0.1
PDLIM1O00151 DUX4L17-201ENST00000557360 1267 ntBASIC15.7■□□□□ 0.1
PDLIM1O00151 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.7■□□□□ 0.1
PDLIM1O00151 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM1O00151 AC099336.1-202ENST00000602961 463 ntBASIC15.7■□□□□ 0.1
PDLIM1O00151 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.7■□□□□ 0.1
PDLIM1O00151 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PDLIM1O00151 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.7■□□□□ 0.1
PDLIM1O00151 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM1O00151 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM1O00151 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.69■□□□□ 0.1
PDLIM1O00151 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.69■□□□□ 0.1
PDLIM1O00151 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PDLIM1O00151 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.69■□□□□ 0.1
PDLIM1O00151 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 GGT4P-201ENST00000623672 1708 ntBASIC15.69■□□□□ 0.1
PDLIM1O00151 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.69■□□□□ 0.1
PDLIM1O00151 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.69■□□□□ 0.1
PDLIM1O00151 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PDLIM1O00151 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.69■□□□□ 0.1
PDLIM1O00151 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDLIM1O00151 MINOS1P3-201ENST00000457048 203 ntBASIC15.69■□□□□ 0.1
PDLIM1O00151 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.69■□□□□ 0.1
PDLIM1O00151 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.69■□□□□ 0.1
PDLIM1O00151 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 AC009533.2-201ENST00000543664 586 ntBASIC15.69■□□□□ 0.1
PDLIM1O00151 KRT126P-201ENST00000549467 1181 ntBASIC15.69■□□□□ 0.1
PDLIM1O00151 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.69■□□□□ 0.1
PDLIM1O00151 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.69■□□□□ 0.1
PDLIM1O00151 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDLIM1O00151 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PDLIM1O00151 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.69■□□□□ 0.1
PDLIM1O00151 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PDLIM1O00151 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDLIM1O00151 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.69■□□□□ 0.1
PDLIM1O00151 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDLIM1O00151 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.69■□□□□ 0.1
PDLIM1O00151 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PDLIM1O00151 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.68■□□□□ 0.1
PDLIM1O00151 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
PDLIM1O00151 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.68■□□□□ 0.1
PDLIM1O00151 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PDLIM1O00151 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.68■□□□□ 0.1
PDLIM1O00151 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.68■□□□□ 0.1
PDLIM1O00151 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.68■□□□□ 0.1
PDLIM1O00151 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 AC023157.3-201ENST00000619086 2088 ntBASIC15.68■□□□□ 0.1
PDLIM1O00151 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDLIM1O00151 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PDLIM1O00151 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms