Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 ELL2P1-201ENST00000413990 1906 ntBASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 FLJ16779-201ENST00000612722 7638 ntBASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CLCA3PQ9Y6N3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 AC092171.3-201ENST00000610122 2651 ntBASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 AC211486.1-202ENST00000416371 468 ntBASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 AC092474.2-201ENST00000424288 719 ntBASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 AC211476.1-201ENST00000503899 468 ntBASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 FAM86C2P-203ENST00000528684 1004 ntBASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 MIR4469-201ENST00000583919 79 ntBASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 AC092902.6-201ENST00000641783 218 ntBASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CLCA3PQ9Y6N3 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCA3PQ9Y6N3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCA3PQ9Y6N3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCA3PQ9Y6N3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCA3PQ9Y6N3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.56■□□□□ 0.08
CLCA3PQ9Y6N3 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCA3PQ9Y6N3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.56■□□□□ 0.08
CLCA3PQ9Y6N3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CLCA3PQ9Y6N3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
CLCA3PQ9Y6N3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CLCA3PQ9Y6N3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms