Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 AC096733.2-201ENST00000609937 1394 ntBASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 MYC-209ENST00000641252 345 ntBASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TRAPPC1Q9Y5R8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 AL671710.1-201ENST00000610245 2349 ntBASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 KRASP1-201ENST00000407852 552 ntBASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 MFAP1P1-201ENST00000442257 1255 ntBASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 MTDHP1-201ENST00000605323 784 ntBASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.46□□□□□ -0.41
TRAPPC1Q9Y5R8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TRAPPC1Q9Y5R8 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
TRAPPC1Q9Y5R8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.42
TRAPPC1Q9Y5R8 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms