Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 AL671710.1-201ENST00000610245 2349 ntBASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 PRAL-201ENST00000624952 3286 ntBASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
KCNIP3Q9Y2W7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 AC073347.1-201ENST00000421633 2643 ntBASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 LINC01144-201ENST00000626198 1710 ntBASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
KCNIP3Q9Y2W7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 RNF152P1-201ENST00000397754 604 ntBASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 NUS1P1-201ENST00000446295 882 ntBASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KCNIP3Q9Y2W7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms