Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLIP2Q9UDT6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 AL391005.1-201ENST00000623953 2435 ntBASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 RNF216P1-203ENST00000404404 2427 ntBASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLIP2Q9UDT6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 AP001059.3-201ENST00000619053 235 ntBASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLIP2Q9UDT6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 AC026691.1-201ENST00000602502 2017 ntBASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 AC092171.3-201ENST00000610122 2651 ntBASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLIP2Q9UDT6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms