Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 MIR1233-2-201ENST00000408138 82 ntBASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 MIR1233-1-201ENST00000408722 82 ntBASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 AC138035.3-201ENST00000622706 2791 ntBASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CALCOCO1Q9P1Z2 AC093525.9-201ENST00000624961 1746 ntBASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 LINC00982-205ENST00000420957 435 ntBASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 BX842568.4-201ENST00000421222 227 ntBASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 TNRC18P2-201ENST00000417666 2714 ntBASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CALCOCO1Q9P1Z2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 AC012640.2-201ENST00000561606 901 ntBASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CALCOCO1Q9P1Z2 AC104109.2-201ENST00000602919 1418 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms