Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL445228.2-201ENST00000605589 952 ntBASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 AC126177.1-201ENST00000547829 2218 ntBASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HDHD3Q9BSH5 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 MIR3652-201ENST00000579335 131 ntBASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HDHD3Q9BSH5 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
HDHD3Q9BSH5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.19
HDHD3Q9BSH5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
HDHD3Q9BSH5 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 AKR1C7P-201ENST00000305623 895 ntBASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 RPS15P9-201ENST00000494093 319 ntBASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 AL121772.3-201ENST00000610840 674 ntBASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
HDHD3Q9BSH5 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms