Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.66■□□□□ 0.1
CGREF1Q99674 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.66■□□□□ 0.1
CGREF1Q99674 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
CGREF1Q99674 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CGREF1Q99674 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CGREF1Q99674 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.66■□□□□ 0.1
CGREF1Q99674 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CGREF1Q99674 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CGREF1Q99674 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CGREF1Q99674 AC104581.4-201ENST00000623126 3052 ntBASIC15.66■□□□□ 0.1
CGREF1Q99674 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CGREF1Q99674 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CGREF1Q99674 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CGREF1Q99674 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CGREF1Q99674 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.65■□□□□ 0.1
CGREF1Q99674 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.65■□□□□ 0.1
CGREF1Q99674 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CGREF1Q99674 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CGREF1Q99674 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CGREF1Q99674 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
CGREF1Q99674 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CGREF1Q99674 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.65■□□□□ 0.1
CGREF1Q99674 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.65■□□□□ 0.1
CGREF1Q99674 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.65■□□□□ 0.1
CGREF1Q99674 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.65■□□□□ 0.1
CGREF1Q99674 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.65■□□□□ 0.1
CGREF1Q99674 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.65■□□□□ 0.1
CGREF1Q99674 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
CGREF1Q99674 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.65■□□□□ 0.1
CGREF1Q99674 AL805961.1-202ENST00000641562 540 ntBASIC15.65■□□□□ 0.1
CGREF1Q99674 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.65■□□□□ 0.1
CGREF1Q99674 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.65■□□□□ 0.1
CGREF1Q99674 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.65■□□□□ 0.1
CGREF1Q99674 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CGREF1Q99674 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.64■□□□□ 0.09
CGREF1Q99674 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
CGREF1Q99674 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CGREF1Q99674 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.64■□□□□ 0.09
CGREF1Q99674 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.64■□□□□ 0.09
CGREF1Q99674 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.64■□□□□ 0.09
CGREF1Q99674 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.64■□□□□ 0.09
CGREF1Q99674 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.64■□□□□ 0.09
CGREF1Q99674 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.64■□□□□ 0.09
CGREF1Q99674 AL732292.2-201ENST00000609649 430 ntBASIC15.64■□□□□ 0.09
CGREF1Q99674 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.64■□□□□ 0.09
CGREF1Q99674 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.64■□□□□ 0.09
CGREF1Q99674 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.64■□□□□ 0.09
CGREF1Q99674 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.64■□□□□ 0.09
CGREF1Q99674 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CGREF1Q99674 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CGREF1Q99674 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CGREF1Q99674 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CGREF1Q99674 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms