Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.53■□□□□ 0.24
NDNQ99608 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.53■□□□□ 0.24
NDNQ99608 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.53■□□□□ 0.24
NDNQ99608 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
NDNQ99608 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 HCG4-201ENST00000418983 998 ntBASIC16.53■□□□□ 0.24
NDNQ99608 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.53■□□□□ 0.24
NDNQ99608 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.53■□□□□ 0.24
NDNQ99608 AC098831.1-202ENST00000438821 336 ntBASIC16.53■□□□□ 0.24
NDNQ99608 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 AC108751.1-201ENST00000490852 363 ntBASIC16.53■□□□□ 0.24
NDNQ99608 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 KRT126P-201ENST00000549467 1181 ntBASIC16.53■□□□□ 0.24
NDNQ99608 AL160237.2-201ENST00000556165 472 ntBASIC16.53■□□□□ 0.24
NDNQ99608 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.53■□□□□ 0.24
NDNQ99608 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.53■□□□□ 0.24
NDNQ99608 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 ACTL9-202ENST00000612068 1252 ntBASIC16.53■□□□□ 0.24
NDNQ99608 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
NDNQ99608 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NDNQ99608 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NDNQ99608 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NDNQ99608 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.53■□□□□ 0.24
NDNQ99608 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NDNQ99608 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDNQ99608 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDNQ99608 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDNQ99608 PCGF3-213ENST00000620529 1899 ntBASIC16.52■□□□□ 0.24
NDNQ99608 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDNQ99608 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDNQ99608 MTHFR-217ENST00000641820 1569 ntBASIC16.52■□□□□ 0.24
NDNQ99608 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDNQ99608 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDNQ99608 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.52■□□□□ 0.24
NDNQ99608 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.52■□□□□ 0.24
NDNQ99608 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDNQ99608 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.52■□□□□ 0.24
NDNQ99608 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NDNQ99608 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.52■□□□□ 0.24
NDNQ99608 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NDNQ99608 C8orf49-201ENST00000525043 1968 ntBASIC16.52■□□□□ 0.24
NDNQ99608 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.52■□□□□ 0.24
NDNQ99608 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NDNQ99608 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.52■□□□□ 0.24
NDNQ99608 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.52■□□□□ 0.24
NDNQ99608 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.52■□□□□ 0.24
NDNQ99608 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.52■□□□□ 0.24
NDNQ99608 AC116407.3-201ENST00000623905 1129 ntBASIC16.52■□□□□ 0.24
NDNQ99608 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NDNQ99608 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NDNQ99608 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.52■□□□□ 0.23
NDNQ99608 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDNQ99608 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDNQ99608 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDNQ99608 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.52■□□□□ 0.23
NDNQ99608 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NDNQ99608 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NDNQ99608 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NDNQ99608 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.52■□□□□ 0.23
NDNQ99608 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.52■□□□□ 0.23
NDNQ99608 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.51■□□□□ 0.23
NDNQ99608 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.51■□□□□ 0.23
NDNQ99608 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDNQ99608 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDNQ99608 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NDNQ99608 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.51■□□□□ 0.23
NDNQ99608 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDNQ99608 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NDNQ99608 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDNQ99608 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDNQ99608 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
NDNQ99608 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDNQ99608 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.51■□□□□ 0.23
NDNQ99608 AC012569.1-201ENST00000591191 1524 ntBASIC16.51■□□□□ 0.23
NDNQ99608 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NDNQ99608 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.51■□□□□ 0.23
NDNQ99608 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDNQ99608 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NDNQ99608 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
NDNQ99608 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms