Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 AC145285.3-201ENST00000564603 959 ntBASIC17.38■□□□□ 0.37
TRIM11Q96F44 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.38■□□□□ 0.37
TRIM11Q96F44 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRIM11Q96F44 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 AC092919.2-201ENST00000623631 1645 ntBASIC17.37■□□□□ 0.37
TRIM11Q96F44 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 AC140658.5-201ENST00000438532 169 ntBASIC17.37■□□□□ 0.37
TRIM11Q96F44 AC009078.2-202ENST00000463353 338 ntBASIC17.37■□□□□ 0.37
TRIM11Q96F44 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRIM11Q96F44 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.37■□□□□ 0.37
TRIM11Q96F44 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 AC092474.2-201ENST00000424288 719 ntBASIC17.36■□□□□ 0.37
TRIM11Q96F44 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 AL078644.1-201ENST00000609881 752 ntBASIC17.36■□□□□ 0.37
TRIM11Q96F44 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.36■□□□□ 0.37
TRIM11Q96F44 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.36■□□□□ 0.37
TRIM11Q96F44 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRIM11Q96F44 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms