Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCLNQ969V3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCLNQ969V3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
NCLNQ969V3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.03■□□□□ 0.16
NCLNQ969V3 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.03■□□□□ 0.16
NCLNQ969V3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NCLNQ969V3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NCLNQ969V3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 ZNF259P1-201ENST00000407656 1365 ntBASIC16.02■□□□□ 0.16
NCLNQ969V3 AC022188.1-201ENST00000620960 1664 ntBASIC16.02■□□□□ 0.16
NCLNQ969V3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.02■□□□□ 0.16
NCLNQ969V3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.02■□□□□ 0.16
NCLNQ969V3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NCLNQ969V3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NCLNQ969V3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NCLNQ969V3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.02■□□□□ 0.16
NCLNQ969V3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.02■□□□□ 0.16
NCLNQ969V3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.02■□□□□ 0.16
NCLNQ969V3 AC106730.1-201ENST00000566722 1090 ntBASIC16.02■□□□□ 0.16
NCLNQ969V3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.02■□□□□ 0.16
NCLNQ969V3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
NCLNQ969V3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.02■□□□□ 0.16
NCLNQ969V3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NCLNQ969V3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.02■□□□□ 0.16
NCLNQ969V3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
NCLNQ969V3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCLNQ969V3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCLNQ969V3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCLNQ969V3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NCLNQ969V3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
NCLNQ969V3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NCLNQ969V3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.02■□□□□ 0.15
NCLNQ969V3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.02■□□□□ 0.15
NCLNQ969V3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.02■□□□□ 0.15
NCLNQ969V3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NCLNQ969V3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.02■□□□□ 0.15
NCLNQ969V3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
NCLNQ969V3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.01■□□□□ 0.15
NCLNQ969V3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NCLNQ969V3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.01■□□□□ 0.15
NCLNQ969V3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
NCLNQ969V3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.01■□□□□ 0.15
NCLNQ969V3 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.01■□□□□ 0.15
NCLNQ969V3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.01■□□□□ 0.15
NCLNQ969V3 AC009947.1-201ENST00000444350 727 ntBASIC16.01■□□□□ 0.15
NCLNQ969V3 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 AC108751.1-201ENST00000490852 363 ntBASIC16.01■□□□□ 0.15
NCLNQ969V3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NCLNQ969V3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.01■□□□□ 0.15
NCLNQ969V3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
NCLNQ969V3 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.01■□□□□ 0.15
NCLNQ969V3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.01■□□□□ 0.15
NCLNQ969V3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NCLNQ969V3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NCLNQ969V3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.01■□□□□ 0.15
NCLNQ969V3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NCLNQ969V3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
NCLNQ969V3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16■□□□□ 0.15
NCLNQ969V3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NCLNQ969V3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16■□□□□ 0.15
NCLNQ969V3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms