Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.45■□□□□ 0.54
USP6NLQ92738 REXO1L6P-201ENST00000603433 1515 ntBASIC18.45■□□□□ 0.54
USP6NLQ92738 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
USP6NLQ92738 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.45■□□□□ 0.54
USP6NLQ92738 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
USP6NLQ92738 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
USP6NLQ92738 KRT223P-202ENST00000449164 1292 ntBASIC18.45■□□□□ 0.54
USP6NLQ92738 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.45■□□□□ 0.54
USP6NLQ92738 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.45■□□□□ 0.54
USP6NLQ92738 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
USP6NLQ92738 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
USP6NLQ92738 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.45■□□□□ 0.54
USP6NLQ92738 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.45■□□□□ 0.54
USP6NLQ92738 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.45■□□□□ 0.54
USP6NLQ92738 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USP6NLQ92738 AC074044.1-201ENST00000609673 707 ntBASIC18.45■□□□□ 0.54
USP6NLQ92738 AC139713.2-201ENST00000641328 2723 ntBASIC18.45■□□□□ 0.54
USP6NLQ92738 CDC14C-201ENST00000428251 1719 ntBASIC18.45■□□□□ 0.54
USP6NLQ92738 AL391256.1-201ENST00000443260 1855 ntBASIC18.45■□□□□ 0.54
USP6NLQ92738 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.45■□□□□ 0.54
USP6NLQ92738 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.45■□□□□ 0.54
USP6NLQ92738 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
USP6NLQ92738 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
USP6NLQ92738 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP6NLQ92738 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.44■□□□□ 0.54
USP6NLQ92738 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.44■□□□□ 0.54
USP6NLQ92738 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.44■□□□□ 0.54
USP6NLQ92738 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
USP6NLQ92738 CROCCP4-201ENST00000457096 498 ntBASIC18.44■□□□□ 0.54
USP6NLQ92738 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.44■□□□□ 0.54
USP6NLQ92738 PACS1-203ENST00000524815 628 ntTSL 4 BASIC18.44■□□□□ 0.54
USP6NLQ92738 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
USP6NLQ92738 AC092552.1-201ENST00000547243 906 ntBASIC18.44■□□□□ 0.54
USP6NLQ92738 RARRES2P5-201ENST00000564013 466 ntBASIC18.44■□□□□ 0.54
USP6NLQ92738 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.44■□□□□ 0.54
USP6NLQ92738 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.44■□□□□ 0.54
USP6NLQ92738 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 AL033527.5-201ENST00000641382 801 ntBASIC18.44■□□□□ 0.54
USP6NLQ92738 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.44■□□□□ 0.54
USP6NLQ92738 GPAA1P2-202ENST00000606848 1787 ntBASIC18.44■□□□□ 0.54
USP6NLQ92738 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.44■□□□□ 0.54
USP6NLQ92738 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.44■□□□□ 0.54
USP6NLQ92738 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
USP6NLQ92738 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP6NLQ92738 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
USP6NLQ92738 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.43■□□□□ 0.54
USP6NLQ92738 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
USP6NLQ92738 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.43■□□□□ 0.54
USP6NLQ92738 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.43■□□□□ 0.54
USP6NLQ92738 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
USP6NLQ92738 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
USP6NLQ92738 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.43■□□□□ 0.54
USP6NLQ92738 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.43■□□□□ 0.54
USP6NLQ92738 AC234783.1-201ENST00000441761 496 ntBASIC18.43■□□□□ 0.54
USP6NLQ92738 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.43■□□□□ 0.54
USP6NLQ92738 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.43■□□□□ 0.54
USP6NLQ92738 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
USP6NLQ92738 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.43■□□□□ 0.54
USP6NLQ92738 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.43■□□□□ 0.54
USP6NLQ92738 AC015936.2-201ENST00000593177 259 ntBASIC18.43■□□□□ 0.54
USP6NLQ92738 AC133552.6-201ENST00000613406 534 ntBASIC18.43■□□□□ 0.54
USP6NLQ92738 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USP6NLQ92738 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
USP6NLQ92738 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms