Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 TMEM261P1-201ENST00000604899 340 ntBASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 MIR6799-201ENST00000620297 69 ntBASIC21.33■■□□□ 1.01
RAPGEF4Q8WZA2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC21.33■■□□□ 1
RAPGEF4Q8WZA2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 FZD10-202ENST00000539839 3282 ntBASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 AC007389.4-201ENST00000454674 793 ntBASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC21.32■■□□□ 1
RAPGEF4Q8WZA2 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 RARRES2P5-201ENST00000564013 466 ntBASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 AL512343.1-201ENST00000605837 169 ntBASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
RAPGEF4Q8WZA2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 MIR8072-201ENST00000614241 80 ntBASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 GGT3P-204ENST00000453783 1664 ntBASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
RAPGEF4Q8WZA2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAPGEF4Q8WZA2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms