Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 TP73-AS1-210ENST00000637775 1455 ntBASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 AC090616.6-201ENST00000582640 721 ntBASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 AC116407.4-201ENST00000623319 1061 ntBASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
RFWD2Q8NHY2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 AL590787.1-201ENST00000568856 1315 ntBASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 SPDYE21P-201ENST00000413323 827 ntBASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 POU5F1P6-201ENST00000466990 990 ntBASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 MIR4492-201ENST00000581627 80 ntBASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RFWD2Q8NHY2 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.27■□□□□ 0.2
RFWD2Q8NHY2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFWD2Q8NHY2 TOP3BP1-201ENST00000420768 1380 ntBASIC16.27■□□□□ 0.2
RFWD2Q8NHY2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.27■□□□□ 0.2
RFWD2Q8NHY2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms