Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 KRT8P23-201ENST00000560090 1207 ntBASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 AC008267.7-201ENST00000624570 1194 ntBASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.99■□□□□ 0.15
RAB42Q8N4Z0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 ADH5P3-201ENST00000433842 1137 ntBASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 SNHG9-202ENST00000564014 471 ntBASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 AC004835.2-201ENST00000603762 682 ntBASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 PCDHA14-201ENST00000506751 2298 ntBASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB42Q8N4Z0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 ME2P1-201ENST00000426028 1970 ntBASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 AL592309.1-201ENST00000443127 649 ntBASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 AC004967.1-201ENST00000453589 447 ntBASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 AC079140.1-201ENST00000508039 487 ntBASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB42Q8N4Z0 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms