Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 AC233702.3-201ENST00000578656 1387 ntBASIC14.41□□□□□ -0.1
C11orf88Q6PI97 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 HLA-A-202ENST00000376806 1854 ntBASIC14.41□□□□□ -0.1
C11orf88Q6PI97 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
C11orf88Q6PI97 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.4□□□□□ -0.1
C11orf88Q6PI97 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.4□□□□□ -0.1
C11orf88Q6PI97 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 KRT18P31-201ENST00000506277 1292 ntBASIC14.4□□□□□ -0.1
C11orf88Q6PI97 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 IGHV3-52-201ENST00000519770 353 ntBASIC14.4□□□□□ -0.1
C11orf88Q6PI97 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 AC074051.2-201ENST00000565115 352 ntBASIC14.4□□□□□ -0.1
C11orf88Q6PI97 AC011840.4-201ENST00000578471 627 ntBASIC14.4□□□□□ -0.1
C11orf88Q6PI97 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 AL592071.1-201ENST00000611956 408 ntBASIC14.4□□□□□ -0.1
C11orf88Q6PI97 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
C11orf88Q6PI97 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms