Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 AC022145.2-201ENST00000598203 171 ntBASIC17.25■□□□□ 0.35
RNF43Q68DV7 AC013467.2-201ENST00000605472 835 ntBASIC17.25■□□□□ 0.35
RNF43Q68DV7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 AL662844.4-201ENST00000606367 2838 ntBASIC17.25■□□□□ 0.35
RNF43Q68DV7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RNF43Q68DV7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RNF43Q68DV7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 AC063926.2-201ENST00000623766 1308 ntBASIC17.24■□□□□ 0.35
RNF43Q68DV7 CROCCP1-201ENST00000426910 5675 ntBASIC17.24■□□□□ 0.35
RNF43Q68DV7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 HLA-J-202ENST00000469281 1241 ntBASIC17.24■□□□□ 0.35
RNF43Q68DV7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.24■□□□□ 0.35
RNF43Q68DV7 AF228730.6-201ENST00000641497 218 ntBASIC17.24■□□□□ 0.35
RNF43Q68DV7 AC084121.3-201ENST00000641716 218 ntBASIC17.24■□□□□ 0.35
RNF43Q68DV7 AC105233.6-201ENST00000642093 218 ntBASIC17.24■□□□□ 0.35
RNF43Q68DV7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RNF43Q68DV7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RNF43Q68DV7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 AC024909.3-201ENST00000611513 2257 ntBASIC17.23■□□□□ 0.35
RNF43Q68DV7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 AC004461.1-201ENST00000412461 403 ntBASIC17.23■□□□□ 0.35
RNF43Q68DV7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 RNA5SP421-201ENST00000516864 134 ntBASIC17.23■□□□□ 0.35
RNF43Q68DV7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 FAM86C2P-203ENST00000528684 1004 ntBASIC17.23■□□□□ 0.35
RNF43Q68DV7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 CYP2A7P1-201ENST00000595391 815 ntBASIC17.23■□□□□ 0.35
RNF43Q68DV7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RNF43Q68DV7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RNF43Q68DV7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF43Q68DV7 AKAP8P1-201ENST00000434743 1349 ntBASIC17.22■□□□□ 0.35
RNF43Q68DV7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF43Q68DV7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RNF43Q68DV7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF43Q68DV7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RNF43Q68DV7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RNF43Q68DV7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms