Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HS1BP3Q53T59 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HS1BP3Q53T59 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HS1BP3Q53T59 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HS1BP3Q53T59 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
HS1BP3Q53T59 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HS1BP3Q53T59 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 AL512652.2-201ENST00000625156 1716 ntBASIC18.4■□□□□ 0.54
HS1BP3Q53T59 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 AL031731.1-201ENST00000642131 2094 ntBASIC18.4■□□□□ 0.54
HS1BP3Q53T59 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 AC004817.3-201ENST00000602957 2129 ntBASIC18.4■□□□□ 0.54
HS1BP3Q53T59 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 HBZP1-201ENST00000354915 429 ntBASIC18.4■□□□□ 0.54
HS1BP3Q53T59 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 BX276092.5-203ENST00000456199 560 ntBASIC18.4■□□□□ 0.54
HS1BP3Q53T59 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 PRELID1P1-202ENST00000567272 903 ntBASIC18.4■□□□□ 0.54
HS1BP3Q53T59 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 AC139749.1-202ENST00000617529 3139 ntBASIC18.4■□□□□ 0.54
HS1BP3Q53T59 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 SNX33P1-201ENST00000592116 1762 ntBASIC18.4■□□□□ 0.54
HS1BP3Q53T59 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HS1BP3Q53T59 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC18.39■□□□□ 0.54
HS1BP3Q53T59 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.39■□□□□ 0.54
HS1BP3Q53T59 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HS1BP3Q53T59 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
HS1BP3Q53T59 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
HS1BP3Q53T59 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.54
HS1BP3Q53T59 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.39■□□□□ 0.54
HS1BP3Q53T59 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
HS1BP3Q53T59 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
HS1BP3Q53T59 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
HS1BP3Q53T59 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 AC103564.2-201ENST00000432853 1299 ntBASIC18.39■□□□□ 0.53
HS1BP3Q53T59 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 MIR3652-201ENST00000579335 131 ntBASIC18.39■□□□□ 0.53
HS1BP3Q53T59 AL121672.3-201ENST00000608644 468 ntBASIC18.39■□□□□ 0.53
HS1BP3Q53T59 LINC01144-201ENST00000626198 1710 ntBASIC18.39■□□□□ 0.53
HS1BP3Q53T59 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC18.39■□□□□ 0.53
HS1BP3Q53T59 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HS1BP3Q53T59 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HS1BP3Q53T59 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HS1BP3Q53T59 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HS1BP3Q53T59 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HS1BP3Q53T59 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HS1BP3Q53T59 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HS1BP3Q53T59 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HS1BP3Q53T59 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HS1BP3Q53T59 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms