Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 FLJ38576-201ENST00000623820 2459 ntBASIC19.5■□□□□ 0.71
PDS5AQ29RF7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 AL391825.1-201ENST00000457671 1364 ntBASIC19.5■□□□□ 0.71
PDS5AQ29RF7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 AC093004.1-201ENST00000508850 424 ntBASIC19.5■□□□□ 0.71
PDS5AQ29RF7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 SPDYE18-201ENST00000510091 1050 ntBASIC19.5■□□□□ 0.71
PDS5AQ29RF7 API5-211ENST00000534695 560 ntTSL 5 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 AC027307.3-201ENST00000594262 1100 ntBASIC19.5■□□□□ 0.71
PDS5AQ29RF7 AL132655.2-201ENST00000596276 594 ntBASIC19.5■□□□□ 0.71
PDS5AQ29RF7 AC074044.1-201ENST00000609673 707 ntBASIC19.5■□□□□ 0.71
PDS5AQ29RF7 AL358472.5-202ENST00000641448 1267 ntBASIC19.5■□□□□ 0.71
PDS5AQ29RF7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDS5AQ29RF7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 AL353779.1-201ENST00000434793 351 ntBASIC19.49■□□□□ 0.71
PDS5AQ29RF7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.49■□□□□ 0.71
PDS5AQ29RF7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 Z97205.2-201ENST00000564697 1639 ntBASIC19.48■□□□□ 0.71
PDS5AQ29RF7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 AP005018.1-201ENST00000525475 301 ntBASIC19.48■□□□□ 0.71
PDS5AQ29RF7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 TP53TG3HP-202ENST00000569755 579 ntBASIC19.48■□□□□ 0.71
PDS5AQ29RF7 SRD5A3P1-201ENST00000603021 949 ntBASIC19.48■□□□□ 0.71
PDS5AQ29RF7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 AC004461.2-201ENST00000629517 803 ntBASIC19.48■□□□□ 0.71
PDS5AQ29RF7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDS5AQ29RF7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDS5AQ29RF7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms