Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
CDK5Q00535 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDK5Q00535 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK5Q00535 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 AC020658.6-201ENST00000623564 1870 ntBASIC14.83□□□□□ -0.04
CDK5Q00535 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
CDK5Q00535 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.83□□□□□ -0.04
CDK5Q00535 AL160237.2-201ENST00000556165 472 ntBASIC14.83□□□□□ -0.04
CDK5Q00535 AC006557.2-201ENST00000592985 1240 ntBASIC14.83□□□□□ -0.04
CDK5Q00535 AC008608.2-201ENST00000606089 416 ntBASIC14.83□□□□□ -0.04
CDK5Q00535 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.83□□□□□ -0.04
CDK5Q00535 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDK5Q00535 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDK5Q00535 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.83□□□□□ -0.04
CDK5Q00535 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CDK5Q00535 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.83□□□□□ -0.04
CDK5Q00535 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDK5Q00535 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDK5Q00535 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.83□□□□□ -0.04
CDK5Q00535 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CDK5Q00535 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDK5Q00535 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.82□□□□□ -0.04
CDK5Q00535 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.82□□□□□ -0.04
CDK5Q00535 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.82□□□□□ -0.04
CDK5Q00535 AC099063.4-201ENST00000641099 1602 ntBASIC14.82□□□□□ -0.04
CDK5Q00535 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 AC023157.3-201ENST00000619086 2088 ntBASIC14.82□□□□□ -0.04
CDK5Q00535 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.82□□□□□ -0.04
CDK5Q00535 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 LAGE3P1-201ENST00000425356 484 ntBASIC14.82□□□□□ -0.04
CDK5Q00535 SCARNA2-201ENST00000458748 420 ntBASIC14.82□□□□□ -0.04
CDK5Q00535 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.82□□□□□ -0.04
CDK5Q00535 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CDK5Q00535 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CDK5Q00535 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.82□□□□□ -0.04
CDK5Q00535 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.82□□□□□ -0.04
CDK5Q00535 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CDK5Q00535 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
CDK5Q00535 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.82□□□□□ -0.04
CDK5Q00535 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDK5Q00535 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.82□□□□□ -0.04
CDK5Q00535 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDK5Q00535 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.82□□□□□ -0.04
CDK5Q00535 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.82□□□□□ -0.04
CDK5Q00535 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.81□□□□□ -0.04
CDK5Q00535 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.81□□□□□ -0.04
CDK5Q00535 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDK5Q00535 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CDK5Q00535 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.81□□□□□ -0.04
CDK5Q00535 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.81□□□□□ -0.04
CDK5Q00535 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CDK5Q00535 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.81□□□□□ -0.04
CDK5Q00535 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.81□□□□□ -0.04
CDK5Q00535 KRT18P27-201ENST00000427733 1299 ntBASIC14.81□□□□□ -0.04
CDK5Q00535 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.81□□□□□ -0.04
CDK5Q00535 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.81□□□□□ -0.04
CDK5Q00535 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.81□□□□□ -0.04
CDK5Q00535 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.81□□□□□ -0.04
CDK5Q00535 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms