Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
PRAMEP78395 AC063926.3-201ENST00000624734 5658 ntBASIC16.62■□□□□ 0.25
PRAMEP78395 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.62■□□□□ 0.25
PRAMEP78395 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PRAMEP78395 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PRAMEP78395 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PRAMEP78395 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEP78395 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.61■□□□□ 0.25
PRAMEP78395 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEP78395 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEP78395 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEP78395 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEP78395 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
PRAMEP78395 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEP78395 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEP78395 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEP78395 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEP78395 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.61■□□□□ 0.25
PRAMEP78395 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.61■□□□□ 0.25
PRAMEP78395 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEP78395 AC021097.1-201ENST00000607902 574 ntBASIC16.61■□□□□ 0.25
PRAMEP78395 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEP78395 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.61■□□□□ 0.25
PRAMEP78395 AC007064.4-201ENST00000637740 555 ntBASIC16.61■□□□□ 0.25
PRAMEP78395 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.61■□□□□ 0.25
PRAMEP78395 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.61■□□□□ 0.25
PRAMEP78395 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PRAMEP78395 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEP78395 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PRAMEP78395 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
PRAMEP78395 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEP78395 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEP78395 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEP78395 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEP78395 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEP78395 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEP78395 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PRAMEP78395 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 RPL13AP23-201ENST00000480739 586 ntBASIC16.6■□□□□ 0.25
PRAMEP78395 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PRAMEP78395 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.6■□□□□ 0.25
PRAMEP78395 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.6■□□□□ 0.25
PRAMEP78395 AC023141.13-201ENST00000604991 943 ntBASIC16.6■□□□□ 0.25
PRAMEP78395 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.6■□□□□ 0.25
PRAMEP78395 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.6■□□□□ 0.25
PRAMEP78395 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PRAMEP78395 IL9RP2-201ENST00000423948 1312 ntBASIC16.6■□□□□ 0.25
PRAMEP78395 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms