Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ASIC1P78348 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ASIC1P78348 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
ASIC1P78348 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ASIC1P78348 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ASIC1P78348 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ASIC1P78348 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ASIC1P78348 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ASIC1P78348 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.35■□□□□ 0.53
ASIC1P78348 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
ASIC1P78348 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ASIC1P78348 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.35■□□□□ 0.53
ASIC1P78348 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ASIC1P78348 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ASIC1P78348 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.34■□□□□ 0.53
ASIC1P78348 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ASIC1P78348 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.34■□□□□ 0.53
ASIC1P78348 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.34■□□□□ 0.53
ASIC1P78348 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.34■□□□□ 0.53
ASIC1P78348 AL591424.1-201ENST00000442569 1213 ntBASIC18.34■□□□□ 0.53
ASIC1P78348 KRT18P3-201ENST00000451602 1288 ntBASIC18.34■□□□□ 0.53
ASIC1P78348 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ASIC1P78348 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.34■□□□□ 0.53
ASIC1P78348 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.34■□□□□ 0.53
ASIC1P78348 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.34■□□□□ 0.53
ASIC1P78348 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ASIC1P78348 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ASIC1P78348 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.33■□□□□ 0.53
ASIC1P78348 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ASIC1P78348 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ASIC1P78348 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ASIC1P78348 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.33■□□□□ 0.53
ASIC1P78348 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.33■□□□□ 0.53
ASIC1P78348 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ASIC1P78348 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ASIC1P78348 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ASIC1P78348 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ASIC1P78348 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ASIC1P78348 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ASIC1P78348 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ASIC1P78348 AC092474.2-201ENST00000424288 719 ntBASIC18.33■□□□□ 0.52
ASIC1P78348 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.33■□□□□ 0.52
ASIC1P78348 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.33■□□□□ 0.52
ASIC1P78348 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
ASIC1P78348 PDPK2P-202ENST00000562415 1191 ntBASIC18.33■□□□□ 0.52
ASIC1P78348 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.33■□□□□ 0.52
ASIC1P78348 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.33■□□□□ 0.52
ASIC1P78348 AC068137.2-201ENST00000605408 478 ntBASIC18.33■□□□□ 0.52
ASIC1P78348 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.33■□□□□ 0.52
ASIC1P78348 AL078644.1-201ENST00000609881 752 ntBASIC18.33■□□□□ 0.52
ASIC1P78348 AC092865.6-201ENST00000642101 219 ntBASIC18.33■□□□□ 0.52
ASIC1P78348 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.33■□□□□ 0.52
ASIC1P78348 AC016027.1-202ENST00000607927 1699 ntBASIC18.33■□□□□ 0.52
ASIC1P78348 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ASIC1P78348 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ASIC1P78348 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.33■□□□□ 0.52
ASIC1P78348 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ASIC1P78348 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
ASIC1P78348 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.33■□□□□ 0.52
ASIC1P78348 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ASIC1P78348 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.33■□□□□ 0.52
ASIC1P78348 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.33■□□□□ 0.52
ASIC1P78348 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ASIC1P78348 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.33■□□□□ 0.52
ASIC1P78348 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
ASIC1P78348 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ASIC1P78348 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ASIC1P78348 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms