Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 KRT18P3-201ENST00000451602 1288 ntBASIC14.36□□□□□ -0.11
HIST1H3AP68431 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 AC092865.6-201ENST00000642101 219 ntBASIC14.36□□□□□ -0.11
HIST1H3AP68431 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
HIST1H3AP68431 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
HIST1H3AP68431 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 WASH6P-202ENST00000359512 1437 ntBASIC14.35□□□□□ -0.11
HIST1H3AP68431 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 MIR648-201ENST00000385046 94 ntBASIC14.35□□□□□ -0.11
HIST1H3AP68431 MED15P5-201ENST00000423150 992 ntBASIC14.35□□□□□ -0.11
HIST1H3AP68431 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H3AP68431 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H3AP68431 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.34□□□□□ -0.11
HIST1H3AP68431 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 AC002056.1-201ENST00000395613 760 ntBASIC14.34□□□□□ -0.11
HIST1H3AP68431 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H3AP68431 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.34□□□□□ -0.11
HIST1H3AP68431 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms