Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.6□□□□□ -0.55
CKS1BP61024 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CKS1BP61024 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS1BP61024 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS1BP61024 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 ANKRD20A18P-201ENST00000359341 492 ntBASIC11.6□□□□□ -0.55
CKS1BP61024 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CKS1BP61024 SAPCD2P2-201ENST00000431719 1174 ntBASIC11.6□□□□□ -0.55
CKS1BP61024 MTCL1P1-201ENST00000446207 792 ntBASIC11.6□□□□□ -0.55
CKS1BP61024 CNP-204ENST00000472031 1019 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS1BP61024 TMA16-209ENST00000513272 803 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS1BP61024 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS1BP61024 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC11.6□□□□□ -0.55
CKS1BP61024 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS1BP61024 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.6□□□□□ -0.55
CKS1BP61024 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
CKS1BP61024 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
CKS1BP61024 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CKS1BP61024 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CKS1BP61024 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
CKS1BP61024 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.6□□□□□ -0.55
CKS1BP61024 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.6□□□□□ -0.55
CKS1BP61024 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
CKS1BP61024 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC11.6□□□□□ -0.55
CKS1BP61024 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.6□□□□□ -0.55
CKS1BP61024 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC11.6□□□□□ -0.55
CKS1BP61024 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS1BP61024 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 KRT8P9-201ENST00000558927 1449 ntBASIC11.6□□□□□ -0.55
CKS1BP61024 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.6□□□□□ -0.55
CKS1BP61024 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
CKS1BP61024 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CKS1BP61024 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC11.59□□□□□ -0.55
CKS1BP61024 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS1BP61024 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
CKS1BP61024 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
CKS1BP61024 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CKS1BP61024 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS1BP61024 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CKS1BP61024 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CKS1BP61024 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CKS1BP61024 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS1BP61024 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS1BP61024 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 AL353692.3-201ENST00000407031 1396 ntBASIC11.59□□□□□ -0.55
CKS1BP61024 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS1BP61024 AL356585.2-201ENST00000625078 2396 ntBASIC11.59□□□□□ -0.55
CKS1BP61024 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS1BP61024 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS1BP61024 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS1BP61024 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CKS1BP61024 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
CKS1BP61024 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS1BP61024 MIR4497-201ENST00000583208 89 ntBASIC11.59□□□□□ -0.55
CKS1BP61024 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
CKS1BP61024 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CKS1BP61024 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CKS1BP61024 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS1BP61024 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms