Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLDN2P57739 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN2P57739 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN2P57739 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CLDN2P57739 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLDN2P57739 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN2P57739 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 AC099398.1-201ENST00000567919 2776 ntBASIC16.15■□□□□ 0.18
CLDN2P57739 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN2P57739 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLDN2P57739 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN2P57739 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN2P57739 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN2P57739 AL080243.2-201ENST00000418783 582 ntBASIC16.15■□□□□ 0.18
CLDN2P57739 AC009477.1-201ENST00000452936 217 ntBASIC16.15■□□□□ 0.18
CLDN2P57739 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.15■□□□□ 0.18
CLDN2P57739 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN2P57739 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN2P57739 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN2P57739 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN2P57739 AC061975.2-201ENST00000581722 295 ntBASIC16.15■□□□□ 0.18
CLDN2P57739 AC024267.1-201ENST00000582320 895 ntBASIC16.15■□□□□ 0.18
CLDN2P57739 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN2P57739 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.15■□□□□ 0.18
CLDN2P57739 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN2P57739 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CLDN2P57739 AC009118.2-201ENST00000613275 655 ntBASIC16.15■□□□□ 0.18
CLDN2P57739 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.15■□□□□ 0.18
CLDN2P57739 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN2P57739 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN2P57739 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN2P57739 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLDN2P57739 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN2P57739 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN2P57739 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.15■□□□□ 0.18
CLDN2P57739 AC087499.5-201ENST00000452760 1342 ntBASIC16.15■□□□□ 0.18
CLDN2P57739 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CLDN2P57739 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN2P57739 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN2P57739 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN2P57739 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN2P57739 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CLDN2P57739 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLDN2P57739 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CLDN2P57739 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.14■□□□□ 0.18
CLDN2P57739 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CLDN2P57739 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 AC005622.1-201ENST00000636801 1703 ntBASIC16.14■□□□□ 0.17
CLDN2P57739 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLDN2P57739 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN2P57739 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.14■□□□□ 0.17
CLDN2P57739 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN2P57739 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN2P57739 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN2P57739 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN2P57739 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.14■□□□□ 0.17
CLDN2P57739 AC004233.3-201ENST00000607794 1269 ntBASIC16.14■□□□□ 0.17
CLDN2P57739 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CLDN2P57739 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CLDN2P57739 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLDN2P57739 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.14■□□□□ 0.17
CLDN2P57739 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms