Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 CYMP-203ENST00000474680 1263 ntBASIC17.41■□□□□ 0.38
CACNA2D1P54289 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 AL355385.1-201ENST00000606123 409 ntBASIC17.41■□□□□ 0.38
CACNA2D1P54289 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CACNA2D1P54289 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CACNA2D1P54289 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 LINC00554-201ENST00000564841 3011 ntBASIC17.4■□□□□ 0.38
CACNA2D1P54289 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 AC005052.1-201ENST00000625181 2492 ntBASIC17.4■□□□□ 0.38
CACNA2D1P54289 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 GGT3P-204ENST00000453783 1664 ntBASIC17.4■□□□□ 0.38
CACNA2D1P54289 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.4■□□□□ 0.38
CACNA2D1P54289 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 AC105233.2-201ENST00000523697 349 ntBASIC17.4■□□□□ 0.38
CACNA2D1P54289 AF228730.5-201ENST00000530288 346 ntBASIC17.4■□□□□ 0.38
CACNA2D1P54289 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 ALG1L8P-201ENST00000533887 760 ntBASIC17.4■□□□□ 0.38
CACNA2D1P54289 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 AP001059.3-201ENST00000619053 235 ntBASIC17.4■□□□□ 0.38
CACNA2D1P54289 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CACNA2D1P54289 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CACNA2D1P54289 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CACNA2D1P54289 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.39■□□□□ 0.38
CACNA2D1P54289 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.38
CACNA2D1P54289 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CACNA2D1P54289 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CACNA2D1P54289 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA2D1P54289 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA2D1P54289 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CACNA2D1P54289 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA2D1P54289 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CACNA2D1P54289 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA2D1P54289 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CACNA2D1P54289 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CACNA2D1P54289 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
CACNA2D1P54289 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms