Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP11P51784 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.49■□□□□ 0.55
USP11P51784 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 AC006449.6-201ENST00000612330 2296 ntBASIC18.48■□□□□ 0.55
USP11P51784 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.48■□□□□ 0.55
USP11P51784 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
USP11P51784 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 MTHFR-217ENST00000641820 1569 ntBASIC18.48■□□□□ 0.55
USP11P51784 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.48■□□□□ 0.55
USP11P51784 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
USP11P51784 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.48■□□□□ 0.55
USP11P51784 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.48■□□□□ 0.55
USP11P51784 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.48■□□□□ 0.55
USP11P51784 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.48■□□□□ 0.55
USP11P51784 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 AC007967.4-201ENST00000614700 386 ntBASIC18.48■□□□□ 0.55
USP11P51784 Z92544.3-201ENST00000624747 417 ntBASIC18.48■□□□□ 0.55
USP11P51784 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.48■□□□□ 0.55
USP11P51784 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.48■□□□□ 0.55
USP11P51784 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP11P51784 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
USP11P51784 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.48■□□□□ 0.55
USP11P51784 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.48■□□□□ 0.55
USP11P51784 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.48■□□□□ 0.55
USP11P51784 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.47■□□□□ 0.55
USP11P51784 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.47■□□□□ 0.55
USP11P51784 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
USP11P51784 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.47■□□□□ 0.55
USP11P51784 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.47■□□□□ 0.55
USP11P51784 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
USP11P51784 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.47■□□□□ 0.55
USP11P51784 CNN2P2-201ENST00000443536 909 ntBASIC18.47■□□□□ 0.55
USP11P51784 CNN2P3-201ENST00000450201 906 ntBASIC18.47■□□□□ 0.55
USP11P51784 AC245100.5-201ENST00000452108 331 ntBASIC18.47■□□□□ 0.55
USP11P51784 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.47■□□□□ 0.55
USP11P51784 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
USP11P51784 MIR4453-201ENST00000584019 89 ntBASIC18.47■□□□□ 0.55
USP11P51784 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 AL136317.3-201ENST00000618497 906 ntBASIC18.47■□□□□ 0.55
USP11P51784 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.47■□□□□ 0.55
USP11P51784 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
USP11P51784 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.47■□□□□ 0.55
USP11P51784 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.47■□□□□ 0.55
USP11P51784 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
USP11P51784 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP11P51784 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.46■□□□□ 0.55
USP11P51784 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.46■□□□□ 0.55
USP11P51784 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
USP11P51784 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.46■□□□□ 0.55
USP11P51784 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.46■□□□□ 0.55
USP11P51784 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.46■□□□□ 0.55
USP11P51784 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP11P51784 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms