Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE6CP51160 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PDE6CP51160 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PDE6CP51160 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.77■□□□□ 0.44
PDE6CP51160 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.77■□□□□ 0.44
PDE6CP51160 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.77■□□□□ 0.44
PDE6CP51160 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 FAM58CP-201ENST00000435741 640 ntBASIC17.77■□□□□ 0.44
PDE6CP51160 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.77■□□□□ 0.44
PDE6CP51160 AC112191.1-201ENST00000523689 701 ntBASIC17.77■□□□□ 0.44
PDE6CP51160 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.77■□□□□ 0.44
PDE6CP51160 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
PDE6CP51160 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PDE6CP51160 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.77■□□□□ 0.44
PDE6CP51160 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE6CP51160 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
PDE6CP51160 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE6CP51160 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.77■□□□□ 0.44
PDE6CP51160 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDE6CP51160 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.77■□□□□ 0.43
PDE6CP51160 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6CP51160 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6CP51160 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PDE6CP51160 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
PDE6CP51160 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.77■□□□□ 0.43
PDE6CP51160 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
PDE6CP51160 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6CP51160 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6CP51160 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PDE6CP51160 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6CP51160 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6CP51160 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDE6CP51160 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE6CP51160 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
PDE6CP51160 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE6CP51160 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 MTHFR-217ENST00000641820 1569 ntBASIC17.76■□□□□ 0.43
PDE6CP51160 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE6CP51160 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.76■□□□□ 0.43
PDE6CP51160 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PDE6CP51160 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.76■□□□□ 0.43
PDE6CP51160 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.76■□□□□ 0.43
PDE6CP51160 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 AC091812.2-201ENST00000619081 385 ntBASIC17.76■□□□□ 0.43
PDE6CP51160 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDE6CP51160 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDE6CP51160 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE6CP51160 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.76■□□□□ 0.43
PDE6CP51160 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.76■□□□□ 0.43
PDE6CP51160 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDE6CP51160 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE6CP51160 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.75■□□□□ 0.43
PDE6CP51160 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
PDE6CP51160 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.75■□□□□ 0.43
PDE6CP51160 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PDE6CP51160 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PDE6CP51160 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PDE6CP51160 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
PDE6CP51160 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms