Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 RAB17-203ENST00000409576 466 ntTSL 3 BASIC10.48□□□□□ -0.73
UBE2AP49459 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2AP49459 AC073648.2-201ENST00000510116 352 ntBASIC10.48□□□□□ -0.73
UBE2AP49459 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2AP49459 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC10.48□□□□□ -0.73
UBE2AP49459 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2AP49459 AC006557.2-201ENST00000592985 1240 ntBASIC10.48□□□□□ -0.73
UBE2AP49459 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2AP49459 MIR1199-201ENST00000621445 119 ntBASIC10.48□□□□□ -0.73
UBE2AP49459 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2AP49459 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
UBE2AP49459 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2AP49459 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 KRT8P49-201ENST00000604166 1432 ntBASIC10.48□□□□□ -0.73
UBE2AP49459 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2AP49459 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2AP49459 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2AP49459 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2AP49459 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2AP49459 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2AP49459 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2AP49459 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2AP49459 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2AP49459 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
UBE2AP49459 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
UBE2AP49459 TCAF2P1-201ENST00000291129 2421 ntBASIC10.47□□□□□ -0.73
UBE2AP49459 RNF216P1-203ENST00000404404 2427 ntBASIC10.47□□□□□ -0.73
UBE2AP49459 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
UBE2AP49459 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2AP49459 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
UBE2AP49459 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
UBE2AP49459 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
UBE2AP49459 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 AC078925.2-201ENST00000624013 1973 ntBASIC10.47□□□□□ -0.73
UBE2AP49459 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2AP49459 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2AP49459 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2AP49459 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2AP49459 NMU-205ENST00000511469 756 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2AP49459 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2AP49459 SDHD-206ENST00000528182 754 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2AP49459 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2AP49459 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC10.47□□□□□ -0.73
UBE2AP49459 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
UBE2AP49459 FP325330.2-201ENST00000624219 5630 ntBASIC10.47□□□□□ -0.73
UBE2AP49459 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2AP49459 AL590787.1-201ENST00000568856 1315 ntBASIC10.47□□□□□ -0.73
UBE2AP49459 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
UBE2AP49459 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2AP49459 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2AP49459 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
UBE2AP49459 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2AP49459 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2AP49459 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
UBE2AP49459 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2AP49459 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms